PlantSME Plant secondary metabolism enzyme database

Sonneratia alba (sonneratia_alba)

Imported from atlas release summary for Sonneratia alba.

1650
Candidate Protein Records
1203
Pathway-Level Records
3109
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.51% Phenylpropanoid pathway 23.86% Alkaloid pathway 21.11% Flavonoid pathway 12.14% Rosmarinic acid pathway 6.82% Steroid pathway 6.57%
Family Distribution
BAHD 6.79% C4H 6.14% POD 4.92% UGT 4.28% C3'H/CYP98A 4.15% 4CL 3.96% 7DLGT 3.76% CYP76 3.35%
Other Families 62.66%
More Families (98)
IFS 102 3.28% UFGT 91 2.93% F3H 79 2.54% NMT 71 2.28% CODM/T6ODM 66 2.12% STR 63 2.03% T3O 60 1.93% CAD 53 1.7% LAC 53 1.7% DWF4/CYP90B1 53 1.7% F3'H/CYP75B 51 1.64% SMT1/SMT2/SMT3 49 1.58% IFR 45 1.45% G8O/G8H 42 1.35% BR6OX2/CYP85A2 39 1.25% HCT 38 1.22% T16H 35 1.13% FNS 35 1.13% GS 34 1.09% H6H 34 1.09% SGD 33 1.06% CSE 33 1.06% CAS 33 1.06% TPS 31 1.0% TAT 30 0.96% COMT 29 0.93% CYP71 29 0.93% GES 27 0.87% RAS 26 0.84% TRI/TRII 24 0.77% ANR 24 0.77% CCR 24 0.77% 16OMT 23 0.74% 7DLH 21 0.68% IO 21 0.68% PMT 21 0.68% PAL 21 0.68% 8HGO 18 0.58% PYKS 17 0.55% ANS/LDOX 16 0.51% F5H/CYP84A 16 0.51% BR6OX1/CYP85A1 15 0.48% SLS 14 0.45% COR 14 0.45% LAMT 14 0.45% CHS 14 0.45% NCS 13 0.42% DFR 13 0.42% F3'5'H/CYP75A 13 0.42% ROT3/CYP90C1 13 0.42% CYP90D1 11 0.35% CPD/CYP90A1 11 0.35% MPO 9 0.29% CPR 9 0.29% FPPS 9 0.29% SMO1/SMO2 8 0.26% SQE 8 0.26% AACT 8 0.26% MVD 8 0.26% CNMT 7 0.23% ADC 7 0.23% HMGR 7 0.23% MVK 7 0.23% ISY 6 0.19% CYP719 6 0.19% CHI 6 0.19% CCoAOMT 6 0.19% HPPR 6 0.19% SQS/FDFT1 6 0.19% GGPPS 6 0.19% CYP80B1 5 0.16% DET2 4 0.13% IDI 4 0.13% TDC 3 0.1% BBE 3 0.1% 6OMT_4OMT_SOMT 3 0.1% TYDC_DDC 3 0.1% CYP51G1 3 0.1% DWF7 3 0.1% HMGS 3 0.1% DXS 3 0.1% HDR/IspH 3 0.1% CYP80F1 2 0.06% FK 2 0.06% DWF5 2 0.06% MDS/IspF 2 0.06% DXR 2 0.06% MCT/IspD 2 0.06% CMK/IspE 2 0.06% GPPS 2 0.06% ODC 1 0.03% XMT_MXMT_DXMT 1 0.03% FLS 1 0.03% CPI1 1 0.03% HYD1 1 0.03% DWF1 1 0.03% HDS/IspG 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 355 19 BAHD (145) View species results
Phenylpropanoid pathway 287 12 POD (128) View species results
Alkaloid pathway 254 20 7DLGT (40) View species results
Flavonoid pathway 146 10 UFGT (76) View species results
Rosmarinic acid pathway 82 7 4CL (25) View species results
Steroid pathway 79 11 SMT1/SMT2/SMT3 (29) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 986 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 275 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
sonneratia_alba_SA_27603 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
sonneratia_alba_SA_27781 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
sonneratia_alba_SA_27799 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
sonneratia_alba_SA_27936 Terpenoid BAHD low borderline BAHD__00050__sp_Q6DR03_ZDHC3_ARATH
sonneratia_alba_SA_28332 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
sonneratia_alba_SA_28387 Terpenoid BAHD medium pass BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
sonneratia_alba_SA_28393 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
sonneratia_alba_SA_28400 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
sonneratia_alba_SA_28942 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
sonneratia_alba_SA_28943 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
sonneratia_alba_SA_29148 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH