Speranskia yunnanensis (speranskia_yunnanensis)
/
Imported from atlas release summary for Speranskia yunnanensis.
1380
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1380
Candidate Genes
C4H
8.04%
C3'H/CYP98A
4.92%
BAHD
4.5%
UGT
4.39%
7DLGT
4.13%
CYP76
4.13%
UFGT
3.99%
F3H
3.76%
Other Families
62.14%
More Families (96)
POD
126
3.57%
IFS
123
3.48%
4CL
99
2.8%
NMT
80
2.26%
CODM/T6ODM
80
2.26%
DWF4/CYP90B1
78
2.21%
F3'H/CYP75B
77
2.18%
T3O
71
2.01%
STR
70
1.98%
TPS
68
1.92%
GES
66
1.87%
H6H
65
1.84%
CAS
65
1.84%
G8O/G8H
56
1.58%
CAD
50
1.41%
T16H
45
1.27%
BR6OX2/CYP85A2
40
1.13%
SMT1/SMT2/SMT3
38
1.08%
FNS
37
1.05%
SGD
33
0.93%
IFR
32
0.91%
SLS
31
0.88%
CSE
31
0.88%
GS
29
0.82%
LAC
28
0.79%
RAS
28
0.79%
PYKS
27
0.76%
TRI/TRII
27
0.76%
F5H/CYP84A
27
0.76%
7DLH
25
0.71%
CYP90D1
25
0.71%
F3'5'H/CYP75A
24
0.68%
PAL
24
0.68%
CYP71
24
0.68%
HCT
23
0.65%
IO
21
0.59%
CPD/CYP90A1
21
0.59%
PMT
20
0.57%
COMT
20
0.57%
COR
18
0.51%
BBE
17
0.48%
NCS
16
0.45%
CNMT
16
0.45%
LAMT
15
0.42%
TAT
14
0.4%
ANR
13
0.37%
CCR
13
0.37%
CYP719
12
0.34%
8HGO
12
0.34%
DFR
12
0.34%
ROT3/CYP90C1
12
0.34%
16OMT
10
0.28%
ANS/LDOX
10
0.28%
ISY
9
0.25%
FPPS
9
0.25%
AACT
7
0.2%
MPO
6
0.17%
CHS
6
0.17%
CCoAOMT
6
0.17%
HPPR
6
0.17%
CPR
6
0.17%
SQE
6
0.17%
ODC
5
0.14%
CYP80F1
5
0.14%
CYP51G1
5
0.14%
SMO1/SMO2
5
0.14%
BR6OX1/CYP85A1
5
0.14%
GGPPS
5
0.14%
MVK
5
0.14%
CYP80B1
4
0.11%
TYDC_DDC
4
0.11%
SQS/FDFT1
4
0.11%
DXS
4
0.11%
XMT_MXMT_DXMT
3
0.08%
CHI
3
0.08%
MCT/IspD
3
0.08%
HMGR
3
0.08%
MVD
3
0.08%
DWF1
2
0.06%
DWF5
2
0.06%
DET2
2
0.06%
HDS/IspG
2
0.06%
HDR/IspH
2
0.06%
IDI
2
0.06%
PMK
2
0.06%
TDC
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
ADC
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
DWF7
1
0.03%
HYD1
1
0.03%
DXR
1
0.03%
MDS/IspF
1
0.03%
HMGS
1
0.03%
CMK/IspE
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 424 | 19 | UGT (141) | View species results |
| Alkaloid pathway | 360 | 22 | 7DLGT (74) | View species results |
| Phenylpropanoid pathway | 242 | 12 | POD (112) | View species results |
| Flavonoid pathway | 195 | 12 | UFGT (131) | View species results |
| Steroid pathway | 82 | 12 | CAS (41) | View species results |
| Rosmarinic acid pathway | 77 | 7 | 4CL (21) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1335 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 210 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| speranskia_yunnanensis_evm.model.ctg000290_np1212.341 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| speranskia_yunnanensis_evm.model.ctg000290_np1212.412 | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| speranskia_yunnanensis_evm.model.ctg000560_np1212.199 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| speranskia_yunnanensis_evm.model.ctg000560_np1212.584 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| speranskia_yunnanensis_evm.model.ctg000560_np1212.659 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| speranskia_yunnanensis_evm.model.ctg000560_np1212.660 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| speranskia_yunnanensis_evm.model.ctg000560_np1212.663 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| speranskia_yunnanensis_evm.model.ctg000560_np1212.718 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| speranskia_yunnanensis_evm.model.ctg000560_np1212.719 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| speranskia_yunnanensis_evm.model.ctg000560_np1212.785 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.1196 | Terpenoid | BAHD | medium | pass | BAHD__00069__sp_Q9C5W0_DGAT3_ARATH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.1572 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.1591 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.1598 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.1606 | Terpenoid | BAHD | medium | pass | BAHD__00053__sp_Q8GXU8_LPAT1_ARATH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.1702 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.172 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.1882 | Terpenoid | BAHD | low | borderline | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.2279 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.2327 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.2344 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.2515 | Terpenoid | BAHD | low | borderline | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.288 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.52 | Terpenoid | BAHD | low | borderline | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| speranskia_yunnanensis_evm.model.ctg000590_np1212.991 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.1394 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.1569 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.1638 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2036 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2116 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2470 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2477 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2478 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2479 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2480 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2481 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2482 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2483 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2485 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2486 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2487 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.260 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.2670 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.3284 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.410 | Terpenoid | BAHD | medium | pass | BAHD__00054__sp_Q8GYW8_SCT_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.720 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| speranskia_yunnanensis_evm.model.ctg000620_np1212.974 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| speranskia_yunnanensis_evm.model.ctg000760_np1212.198 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| speranskia_yunnanensis_evm.model.ctg000760_np1212.203 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| speranskia_yunnanensis_evm.model.ctg000760_np1212.319 | Terpenoid | BAHD | medium | pass | BAHD__00063__sp_Q93VV0_ZDHC6_ARATH |