Sphagnum girgensohnii (sphagnum_girgensohnii)
Imported from atlas release summary for Sphagnum girgensohnii.
1324
Candidate Protein Records
917
Pathway-Level Records
2145
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2145
Family-Level Calls
POD
7.79%
BAHD
7.55%
C4H
5.08%
4CL
5.03%
C3'H/CYP98A
4.62%
NMT
4.01%
STR
3.4%
CYP76
2.8%
Other Families
59.72%
More Families (96)
PAL
57
2.66%
T3O
53
2.47%
IFS
51
2.38%
IFR
49
2.28%
GS
48
2.24%
PYKS
48
2.24%
F3H
47
2.19%
CAD
45
2.1%
BR6OX2/CYP85A2
44
2.05%
DWF4/CYP90B1
37
1.72%
F3'H/CYP75B
32
1.49%
CHS
30
1.4%
TRI/TRII
29
1.35%
SMT1/SMT2/SMT3
28
1.31%
CYP71
28
1.31%
UGT
27
1.26%
CODM/T6ODM
26
1.21%
H6H
21
0.98%
T16H
20
0.93%
DFR
19
0.89%
CCR
19
0.89%
RAS
18
0.84%
F3'5'H/CYP75A
17
0.79%
8HGO
16
0.75%
ANR
16
0.75%
CSE
16
0.75%
CAS
16
0.75%
AACT
16
0.75%
SLS
15
0.7%
LAC
15
0.7%
IO
14
0.65%
7DLGT
14
0.65%
HCT
14
0.65%
G8O/G8H
13
0.61%
COMT
13
0.61%
CYP90D1
13
0.61%
7DLH
12
0.56%
UFGT
12
0.56%
SGD
11
0.51%
CPD/CYP90A1
11
0.51%
TPS
11
0.51%
FNS
10
0.47%
ISY
9
0.42%
BR6OX1/CYP85A1
9
0.42%
DXS
9
0.42%
16OMT
8
0.37%
COR
7
0.33%
CPR
7
0.33%
ROT3/CYP90C1
7
0.33%
SMO1/SMO2
7
0.33%
FK
7
0.33%
GGPPS
7
0.33%
CNMT
6
0.28%
MPO
6
0.28%
F5H/CYP84A
6
0.28%
HPPR
6
0.28%
DET2
6
0.28%
MVK
6
0.28%
PMT
5
0.23%
NCS
5
0.23%
TYDC_DDC
5
0.23%
GES
5
0.23%
CCoAOMT
5
0.23%
DWF5
5
0.23%
HDS/IspG
5
0.23%
FPPS
5
0.23%
LAMT
4
0.19%
CYP719
4
0.19%
TDC
4
0.19%
BBE
4
0.19%
SQS/FDFT1
4
0.19%
SQE
4
0.19%
HDR/IspH
4
0.19%
ODC
3
0.14%
FLS
3
0.14%
ANS/LDOX
3
0.14%
TAT
3
0.14%
CYP51G1
3
0.14%
DWF1
3
0.14%
HMGR
3
0.14%
HMGS
3
0.14%
MDS/IspF
3
0.14%
CYP80B1
2
0.09%
6OMT_4OMT_SOMT
2
0.09%
CHI
2
0.09%
DWF7
2
0.09%
HYD1
2
0.09%
CMK/IspE
2
0.09%
MVD
2
0.09%
DXR
2
0.09%
ADC
1
0.05%
XMT_MXMT_DXMT
1
0.05%
CPI1
1
0.05%
IDI
1
0.05%
PMK
1
0.05%
MCT/IspD
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 266 | 12 | POD (158) | View species results |
| Terpenoid pathway | 221 | 20 | BAHD (128) | View species results |
| Alkaloid pathway | 192 | 20 | NMT (35) | View species results |
| Flavonoid pathway | 94 | 10 | CHS (30) | View species results |
| Rosmarinic acid pathway | 86 | 7 | C4H (28) | View species results |
| Steroid pathway | 58 | 13 | CAS (14) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 659 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 194 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Sgircontig_5230191870 | Flavonoid | IFS | medium | borderline |
| Sgircontig_5460203130 | Flavonoid | IFS | low | borderline |
| Sgircontig_5480204370 | Flavonoid | IFS | low | borderline |
| Sgircontig_5480204380 | Flavonoid | IFS | low | borderline |
| Sgircontig_5480204390 | Flavonoid | IFS | low | borderline |
| Sgircontig_5490205870 | Flavonoid | IFS | medium | borderline |
| Sgircontig_5580212130 | Flavonoid | IFS | low | borderline |
| Sgircontig_570214860 | Flavonoid | IFS | low | borderline |
| Sgircontig_6390230790 | Flavonoid | IFS | low | borderline |
| Sgircontig_6820244340 | Flavonoid | IFS | low | borderline |
| Sgircontig_7150254010 | Flavonoid | IFS | medium | borderline |
| Sgircontig_7170255030 | Flavonoid | IFS | low | borderline |
| Sgircontig_7240260530 | Flavonoid | IFS | low | borderline |
| Sgircontig_7250261660 | Flavonoid | IFS | low | borderline |
| Sgircontig_7260261860 | Flavonoid | IFS | low | borderline |
| Sgircontig_7680278240 | Flavonoid | IFS | medium | borderline |
| Sgircontig_8300294380 | Flavonoid | IFS | medium | borderline |
| Sgircontig_8710304150 | Flavonoid | IFS | low | borderline |
| Sgircontig_8760305480 | Flavonoid | IFS | low | borderline |
| Sgircontig_8980312640 | Flavonoid | IFS | medium | borderline |
| Sgircontig_9320324640 | Flavonoid | IFS | low | borderline |
| Sgircontig_9390328220 | Flavonoid | IFS | low | borderline |
| Sgircontig_9730343660 | Flavonoid | IFS | low | borderline |
| Sgircontig_10000001350 | Flavonoid | PAL | high | pass |
| Sgircontig_10440018780 | Flavonoid | PAL | low | borderline |
| Sgircontig_1070026140 | Flavonoid | PAL | high | pass |
| Sgircontig_10960031890 | Flavonoid | PAL | high | pass |
| Sgircontig_10960031910 | Flavonoid | PAL | high | pass |
| Sgircontig_2200089600 | Flavonoid | PAL | high | pass |
| Sgircontig_3970152850 | Flavonoid | PAL | high | pass |
| Sgircontig_4050154100 | Flavonoid | PAL | high | pass |
| Sgircontig_420157100 | Flavonoid | PAL | high | pass |
| Sgircontig_4400166010 | Flavonoid | PAL | high | pass |
| Sgircontig_4840176550 | Flavonoid | PAL | medium | pass |
| Sgircontig_5120186340 | Flavonoid | PAL | high | pass |
| Sgircontig_5490206020 | Flavonoid | PAL | high | pass |
| Sgircontig_5710215520 | Flavonoid | PAL | high | pass |
| Sgircontig_6340229040 | Flavonoid | PAL | high | pass |
| Sgircontig_6340229080 | Flavonoid | PAL | high | pass |
| Sgircontig_6700238840 | Flavonoid | PAL | high | pass |
| Sgircontig_7700279190 | Flavonoid | PAL | high | pass |
| Sgircontig_9710342630 | Flavonoid | PAL | high | pass |
| Sgircontig_3050117370 | Flavonoid | UFGT | medium | pass |
| Sgircontig_3180120220 | Flavonoid | UFGT | medium | pass |
| Sgircontig_5100184120 | Flavonoid | UFGT | low | borderline |
| Sgircontig_5460202320 | Flavonoid | UFGT | low | borderline |
| Sgircontig_5490209770 | Flavonoid | UFGT | low | borderline |
| Sgircontig_6870246310 | Flavonoid | UFGT | medium | pass |
| Sgircontig_7070251640 | Flavonoid | UFGT | medium | pass |
| Sgircontig_8740304970 | Flavonoid | UFGT | high | pass |