PlantSME Plant secondary metabolism enzyme database

Sphagnum palustre (sphagnum_palustre)

Imported from atlas release summary for Sphagnum palustre.

1110
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 29.82% Terpenoid pathway 25.41% Alkaloid pathway 20.9% Flavonoid pathway 9.46% Rosmarinic acid pathway 8.65% Steroid pathway 5.77%
Family Distribution
POD 7.78% BAHD 7.66% 4CL 6.45% C3'H/CYP98A 4.81% NMT 4.53% C4H 4.46% STR 3.56% CYP76 3.09%
Other Families 57.66%
More Families (97)
IFS 70 2.74% IFR 62 2.42% GS 60 2.35% T3O 53 2.07% PYKS 49 1.92% F3H 49 1.92% TRI/TRII 47 1.84% DWF4/CYP90B1 43 1.68% CAD 40 1.56% BR6OX2/CYP85A2 40 1.56% F3'H/CYP75B 39 1.52% CSE 33 1.29% UFGT 31 1.21% UGT 31 1.21% H6H 30 1.17% CHS 29 1.13% CODM/T6ODM 28 1.09% CYP71 28 1.09% SMT1/SMT2/SMT3 27 1.06% 7DLGT 26 1.02% COMT 25 0.98% RAS 24 0.94% G8O/G8H 23 0.9% CCR 20 0.78% HCT 19 0.74% CAS 19 0.74% DFR 18 0.7% PAL 18 0.7% 16OMT 17 0.66% 8HGO 17 0.66% T16H 17 0.66% IO 16 0.63% SLS 16 0.63% F3'5'H/CYP75A 16 0.63% LAC 16 0.63% AACT 16 0.63% CYP90D1 15 0.59% 7DLH 14 0.55% ANR 14 0.55% GGPPS 14 0.55% BR6OX1/CYP85A1 13 0.51% CNMT 12 0.47% CPD/CYP90A1 12 0.47% SGD 11 0.43% FNS 11 0.43% DET2 10 0.39% HDS/IspG 10 0.39% PMT 9 0.35% COR 9 0.35% CPR 9 0.35% SQE 9 0.35% FK 9 0.35% ISY 8 0.31% ANS/LDOX 8 0.31% SMO1/SMO2 8 0.31% HMGR 8 0.31% TAT 7 0.27% FPPS 7 0.27% BBE 6 0.23% DWF5 6 0.23% ROT3/CYP90C1 6 0.23% DXS 6 0.23% TPS 6 0.23% ODC 5 0.2% CCoAOMT 5 0.2% HPPR 5 0.2% SQS/FDFT1 5 0.2% CMK/IspE 5 0.2% MVK 5 0.2% MPO 4 0.16% GES 4 0.16% NCS 4 0.16% TYDC_DDC 4 0.16% F5H/CYP84A 4 0.16% DWF1 4 0.16% HDR/IspH 4 0.16% 6OMT_4OMT_SOMT 3 0.12% ADC 3 0.12% CYP80B1 3 0.12% TDC 3 0.12% CPI1 3 0.12% HYD1 3 0.12% MCT/IspD 3 0.12% IDI 3 0.12% MVD 3 0.12% DXR 3 0.12% CYP719 2 0.08% CYP80F1 2 0.08% FLS 2 0.08% CHI 2 0.08% CYP51G1 2 0.08% DWF7 2 0.08% PMK 2 0.08% LAMT 1 0.04% XMT_MXMT_DXMT 1 0.04% HMGS 1 0.04% MDS/IspF 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 331 11 POD (191) View species results
Terpenoid pathway 282 21 BAHD (162) View species results
Alkaloid pathway 232 18 NMT (49) View species results
Flavonoid pathway 105 9 4CL (29) View species results
Rosmarinic acid pathway 96 7 C4H (30) View species results
Steroid pathway 64 12 CAS (18) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 750 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 239 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Spal3506700168510 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Spal3506830168740 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Spal3507310169340 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Spal3513610177950 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Spal3513800178590 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Spal3517950187830 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3524770195590 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Spal3528280199630 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Spal3528360199750 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Spal3529610204850 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Spal3532090211600 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
Spal3539050225290 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Spal3539830228080 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Spal3541480233780 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3541770234280 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3543400237010 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Spal3545040241420 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Spal3545160242270 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Spal3546110244410 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
Spal3546620246820 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Spal3549540253500 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Spal3549830255170 Alkaloid NMT low borderline NMT__00019__sp_O22781_SUVH2_ARATH
Spal3553120264910 Alkaloid NMT low borderline NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Spal3554270268610 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Spal3554340268800 Alkaloid NMT low borderline NMT__00039__sp_Q84W92_ANM13_ARATH
Spal3556380274100 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
Spal3557200277140 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
Spal3557650279580 Alkaloid NMT medium borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3557750279780 Alkaloid NMT low borderline NMT__00021__sp_O64827_SUVR5_ARATH
Spal3558790284150 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Spal3559090284830 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Spal3559630286730 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3559630286740 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3559630286750 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3559630286770 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3559630286790 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3560490290460 Alkaloid NMT medium borderline NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Spal3560560290790 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Spal3561000292580 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Spal3562550298900 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Spal3567140317390 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Spal3569480328150 Alkaloid NMT medium borderline NMT__00060__sp_Q9MAT5_ANM10_ARATH
Spal3570210331230 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
Spal3571830337350 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Spal3571930337750 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Spal3573070341850 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Spal3575480351760 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3576480356460 Alkaloid NMT medium pass NMT__00023__sp_O82210_ANM12_ARATH
Spal3579890369610 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Spal3579970369950 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH