Sphagnum palustre (sphagnum_palustre)
Imported from atlas release summary for Sphagnum palustre.
1110
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1110
Candidate Genes
POD
7.78%
BAHD
7.66%
4CL
6.45%
C3'H/CYP98A
4.81%
NMT
4.53%
C4H
4.46%
STR
3.56%
CYP76
3.09%
Other Families
57.66%
More Families (97)
IFS
70
2.74%
IFR
62
2.42%
GS
60
2.35%
T3O
53
2.07%
PYKS
49
1.92%
F3H
49
1.92%
TRI/TRII
47
1.84%
DWF4/CYP90B1
43
1.68%
CAD
40
1.56%
BR6OX2/CYP85A2
40
1.56%
F3'H/CYP75B
39
1.52%
CSE
33
1.29%
UFGT
31
1.21%
UGT
31
1.21%
H6H
30
1.17%
CHS
29
1.13%
CODM/T6ODM
28
1.09%
CYP71
28
1.09%
SMT1/SMT2/SMT3
27
1.06%
7DLGT
26
1.02%
COMT
25
0.98%
RAS
24
0.94%
G8O/G8H
23
0.9%
CCR
20
0.78%
HCT
19
0.74%
CAS
19
0.74%
DFR
18
0.7%
PAL
18
0.7%
16OMT
17
0.66%
8HGO
17
0.66%
T16H
17
0.66%
IO
16
0.63%
SLS
16
0.63%
F3'5'H/CYP75A
16
0.63%
LAC
16
0.63%
AACT
16
0.63%
CYP90D1
15
0.59%
7DLH
14
0.55%
ANR
14
0.55%
GGPPS
14
0.55%
BR6OX1/CYP85A1
13
0.51%
CNMT
12
0.47%
CPD/CYP90A1
12
0.47%
SGD
11
0.43%
FNS
11
0.43%
DET2
10
0.39%
HDS/IspG
10
0.39%
PMT
9
0.35%
COR
9
0.35%
CPR
9
0.35%
SQE
9
0.35%
FK
9
0.35%
ISY
8
0.31%
ANS/LDOX
8
0.31%
SMO1/SMO2
8
0.31%
HMGR
8
0.31%
TAT
7
0.27%
FPPS
7
0.27%
BBE
6
0.23%
DWF5
6
0.23%
ROT3/CYP90C1
6
0.23%
DXS
6
0.23%
TPS
6
0.23%
ODC
5
0.2%
CCoAOMT
5
0.2%
HPPR
5
0.2%
SQS/FDFT1
5
0.2%
CMK/IspE
5
0.2%
MVK
5
0.2%
MPO
4
0.16%
GES
4
0.16%
NCS
4
0.16%
TYDC_DDC
4
0.16%
F5H/CYP84A
4
0.16%
DWF1
4
0.16%
HDR/IspH
4
0.16%
6OMT_4OMT_SOMT
3
0.12%
ADC
3
0.12%
CYP80B1
3
0.12%
TDC
3
0.12%
CPI1
3
0.12%
HYD1
3
0.12%
MCT/IspD
3
0.12%
IDI
3
0.12%
MVD
3
0.12%
DXR
3
0.12%
CYP719
2
0.08%
CYP80F1
2
0.08%
FLS
2
0.08%
CHI
2
0.08%
CYP51G1
2
0.08%
DWF7
2
0.08%
PMK
2
0.08%
LAMT
1
0.04%
XMT_MXMT_DXMT
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 331 | 11 | POD (191) | View species results |
| Terpenoid pathway | 282 | 21 | BAHD (162) | View species results |
| Alkaloid pathway | 232 | 18 | NMT (49) | View species results |
| Flavonoid pathway | 105 | 9 | 4CL (29) | View species results |
| Rosmarinic acid pathway | 96 | 7 | C4H (30) | View species results |
| Steroid pathway | 64 | 12 | CAS (18) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 750 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 239 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Spal2188930009670 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal2205480013500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal2318080025250 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal2550590029460 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal2555610030240 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal2557700033480 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal2591880043310 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal2761180049410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal2762820050130 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3043660054510 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3044420055280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3148490059330 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3275470067090 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3280630071910 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3282220072340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3301770083050 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3319920086850 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3321860087360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3402750101760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3403150102590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3414380106910 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3456400116510 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3456470116690 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3458450120720 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3461080124900 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3461080124910 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3479800138580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3483020144850 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3485040147770 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3488520150550 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3506960168950 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3511030170740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3517060185100 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3517900187540 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3525470197270 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3533100215220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3533520215740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3535970218080 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3536380219870 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3538790224040 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3540640229320 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3541190232350 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3543090235310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3543300236380 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3545080241720 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3546830247660 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Spal3547880248960 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3548040249570 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3548040249580 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Spal3550950258500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |