Sphagnum palustre (sphagnum_palustre)
Imported from atlas release summary for Sphagnum palustre.
1586
Candidate Protein Records
1110
Pathway-Level Records
2558
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2558
Family-Level Calls
POD
7.78%
BAHD
7.66%
4CL
6.45%
C3'H/CYP98A
4.81%
NMT
4.53%
C4H
4.46%
STR
3.56%
CYP76
3.09%
Other Families
57.66%
More Families (97)
IFS
70
2.74%
IFR
62
2.42%
GS
60
2.35%
T3O
53
2.07%
PYKS
49
1.92%
F3H
49
1.92%
TRI/TRII
47
1.84%
DWF4/CYP90B1
43
1.68%
CAD
40
1.56%
BR6OX2/CYP85A2
40
1.56%
F3'H/CYP75B
39
1.52%
CSE
33
1.29%
UFGT
31
1.21%
UGT
31
1.21%
H6H
30
1.17%
CHS
29
1.13%
CODM/T6ODM
28
1.09%
CYP71
28
1.09%
SMT1/SMT2/SMT3
27
1.06%
7DLGT
26
1.02%
COMT
25
0.98%
RAS
24
0.94%
G8O/G8H
23
0.9%
CCR
20
0.78%
HCT
19
0.74%
CAS
19
0.74%
DFR
18
0.7%
PAL
18
0.7%
16OMT
17
0.66%
8HGO
17
0.66%
T16H
17
0.66%
IO
16
0.63%
SLS
16
0.63%
F3'5'H/CYP75A
16
0.63%
LAC
16
0.63%
AACT
16
0.63%
CYP90D1
15
0.59%
7DLH
14
0.55%
ANR
14
0.55%
GGPPS
14
0.55%
BR6OX1/CYP85A1
13
0.51%
CNMT
12
0.47%
CPD/CYP90A1
12
0.47%
SGD
11
0.43%
FNS
11
0.43%
DET2
10
0.39%
HDS/IspG
10
0.39%
PMT
9
0.35%
COR
9
0.35%
CPR
9
0.35%
SQE
9
0.35%
FK
9
0.35%
ISY
8
0.31%
ANS/LDOX
8
0.31%
SMO1/SMO2
8
0.31%
HMGR
8
0.31%
TAT
7
0.27%
FPPS
7
0.27%
BBE
6
0.23%
DWF5
6
0.23%
ROT3/CYP90C1
6
0.23%
DXS
6
0.23%
TPS
6
0.23%
ODC
5
0.2%
CCoAOMT
5
0.2%
HPPR
5
0.2%
SQS/FDFT1
5
0.2%
CMK/IspE
5
0.2%
MVK
5
0.2%
MPO
4
0.16%
GES
4
0.16%
NCS
4
0.16%
TYDC_DDC
4
0.16%
F5H/CYP84A
4
0.16%
DWF1
4
0.16%
HDR/IspH
4
0.16%
6OMT_4OMT_SOMT
3
0.12%
ADC
3
0.12%
CYP80B1
3
0.12%
TDC
3
0.12%
CPI1
3
0.12%
HYD1
3
0.12%
MCT/IspD
3
0.12%
IDI
3
0.12%
MVD
3
0.12%
DXR
3
0.12%
CYP719
2
0.08%
CYP80F1
2
0.08%
FLS
2
0.08%
CHI
2
0.08%
CYP51G1
2
0.08%
DWF7
2
0.08%
PMK
2
0.08%
LAMT
1
0.04%
XMT_MXMT_DXMT
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 331 | 11 | POD (191) | View species results |
| Terpenoid pathway | 282 | 21 | BAHD (162) | View species results |
| Alkaloid pathway | 232 | 18 | NMT (49) | View species results |
| Flavonoid pathway | 105 | 9 | 4CL (29) | View species results |
| Rosmarinic acid pathway | 96 | 7 | C4H (30) | View species results |
| Steroid pathway | 64 | 12 | CAS (18) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 750 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 239 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Spal3531330208320 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3531350208380 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3532120211830 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3541630234120 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3542920235100 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3543330236600 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3544280240520 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3544970241210 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3547980249410 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3552010261260 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3558380282230 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3561180293040 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3561760295860 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3562480298540 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3565680310930 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3567080317120 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3567900320530 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3573320342860 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3574070345880 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3574760349020 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3575370351020 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3578970365580 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3580310372030 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3581000375880 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3582490382580 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3586880387720 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3586890387740 | Rosmarinic Acid | 4CL | low | borderline |
| Spal3598840389040 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3598850389070 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3632640394050 | Rosmarinic Acid | 4CL | medium | pass |
| Spal3632650394090 | Rosmarinic Acid | 4CL | medium | pass |
| Spal2183520007170 | Rosmarinic Acid | C4H | medium | pass |
| Spal2189130009760 | Rosmarinic Acid | C4H | low | borderline |
| Spal2203160012610 | Rosmarinic Acid | C4H | low | borderline |
| Spal2205510013540 | Rosmarinic Acid | C4H | low | borderline |
| Spal2557810033680 | Rosmarinic Acid | C4H | low | borderline |
| Spal2563360039720 | Rosmarinic Acid | C4H | low | borderline |
| Spal2565650040480 | Rosmarinic Acid | C4H | medium | pass |
| Spal2582470041710 | Rosmarinic Acid | C4H | low | borderline |
| Spal2628110047350 | Rosmarinic Acid | C4H | low | borderline |
| Spal3269490062800 | Rosmarinic Acid | C4H | low | borderline |
| Spal3270920063350 | Rosmarinic Acid | C4H | medium | pass |
| Spal3273910064860 | Rosmarinic Acid | C4H | medium | pass |
| Spal3278970070690 | Rosmarinic Acid | C4H | medium | pass |
| Spal3279380070990 | Rosmarinic Acid | C4H | low | borderline |
| Spal3300020078780 | Rosmarinic Acid | C4H | low | borderline |
| Spal3301320081760 | Rosmarinic Acid | C4H | low | borderline |
| Spal3302210083850 | Rosmarinic Acid | C4H | medium | pass |
| Spal3303750084610 | Rosmarinic Acid | C4H | low | borderline |
| Spal3322230087800 | Rosmarinic Acid | C4H | low | borderline |