PlantSME Plant secondary metabolism enzyme database

Sphagnum palustre (sphagnum_palustre)

Imported from atlas release summary for Sphagnum palustre.

1586
Candidate Protein Records
1110
Pathway-Level Records
2558
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 29.82% Terpenoid pathway 25.41% Alkaloid pathway 20.9% Flavonoid pathway 9.46% Rosmarinic acid pathway 8.65% Steroid pathway 5.77%
Family Distribution
POD 7.78% BAHD 7.66% 4CL 6.45% C3'H/CYP98A 4.81% NMT 4.53% C4H 4.46% STR 3.56% CYP76 3.09%
Other Families 57.66%
More Families (97)
IFS 70 2.74% IFR 62 2.42% GS 60 2.35% T3O 53 2.07% PYKS 49 1.92% F3H 49 1.92% TRI/TRII 47 1.84% DWF4/CYP90B1 43 1.68% CAD 40 1.56% BR6OX2/CYP85A2 40 1.56% F3'H/CYP75B 39 1.52% CSE 33 1.29% UFGT 31 1.21% UGT 31 1.21% H6H 30 1.17% CHS 29 1.13% CODM/T6ODM 28 1.09% CYP71 28 1.09% SMT1/SMT2/SMT3 27 1.06% 7DLGT 26 1.02% COMT 25 0.98% RAS 24 0.94% G8O/G8H 23 0.9% CCR 20 0.78% HCT 19 0.74% CAS 19 0.74% DFR 18 0.7% PAL 18 0.7% 16OMT 17 0.66% 8HGO 17 0.66% T16H 17 0.66% IO 16 0.63% SLS 16 0.63% F3'5'H/CYP75A 16 0.63% LAC 16 0.63% AACT 16 0.63% CYP90D1 15 0.59% 7DLH 14 0.55% ANR 14 0.55% GGPPS 14 0.55% BR6OX1/CYP85A1 13 0.51% CNMT 12 0.47% CPD/CYP90A1 12 0.47% SGD 11 0.43% FNS 11 0.43% DET2 10 0.39% HDS/IspG 10 0.39% PMT 9 0.35% COR 9 0.35% CPR 9 0.35% SQE 9 0.35% FK 9 0.35% ISY 8 0.31% ANS/LDOX 8 0.31% SMO1/SMO2 8 0.31% HMGR 8 0.31% TAT 7 0.27% FPPS 7 0.27% BBE 6 0.23% DWF5 6 0.23% ROT3/CYP90C1 6 0.23% DXS 6 0.23% TPS 6 0.23% ODC 5 0.2% CCoAOMT 5 0.2% HPPR 5 0.2% SQS/FDFT1 5 0.2% CMK/IspE 5 0.2% MVK 5 0.2% MPO 4 0.16% GES 4 0.16% NCS 4 0.16% TYDC_DDC 4 0.16% F5H/CYP84A 4 0.16% DWF1 4 0.16% HDR/IspH 4 0.16% 6OMT_4OMT_SOMT 3 0.12% ADC 3 0.12% CYP80B1 3 0.12% TDC 3 0.12% CPI1 3 0.12% HYD1 3 0.12% MCT/IspD 3 0.12% IDI 3 0.12% MVD 3 0.12% DXR 3 0.12% CYP719 2 0.08% CYP80F1 2 0.08% FLS 2 0.08% CHI 2 0.08% CYP51G1 2 0.08% DWF7 2 0.08% PMK 2 0.08% LAMT 1 0.04% XMT_MXMT_DXMT 1 0.04% HMGS 1 0.04% MDS/IspF 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 331 11 POD (191) View species results
Terpenoid pathway 282 21 BAHD (162) View species results
Alkaloid pathway 232 18 NMT (49) View species results
Flavonoid pathway 105 9 4CL (29) View species results
Rosmarinic acid pathway 96 7 C4H (30) View species results
Steroid pathway 64 12 CAS (18) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 750 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 239 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Spal3503060160910 Flavonoid UFGT medium pass
Spal3506320167850 Flavonoid UFGT medium pass
Spal3516260182610 Flavonoid UFGT high pass
Spal3518300188500 Flavonoid UFGT medium pass
Spal3543090235500 Flavonoid UFGT medium pass
Spal3543310236440 Flavonoid UFGT medium pass
Spal3556320273930 Flavonoid UFGT low borderline
Spal3561270294050 Flavonoid UFGT medium pass
Spal3561270294080 Flavonoid UFGT medium pass
Spal3561270294120 Flavonoid UFGT medium pass
Spal3562000296610 Flavonoid UFGT low borderline
Spal3564060304020 Flavonoid UFGT medium pass
Spal3574950349540 Flavonoid UFGT low borderline
Spal3576250355740 Flavonoid UFGT medium pass
Spal3582190380690 Flavonoid UFGT medium pass
Spal3604050389730 Flavonoid UFGT low borderline