PlantSME Plant secondary metabolism enzyme database

Spirodela polyrhiza (spirodela_polyrhiza)

Imported from atlas release summary for Spirodela polyrhiza.

768
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 237 19 BAHD (102) View species results
Phenylpropanoid pathway 176 11 POD (79) View species results
Alkaloid pathway 153 20 NMT (29) View species results
Flavonoid pathway 89 11 UFGT (48) View species results
Rosmarinic acid pathway 70 7 C4H (29) View species results
Steroid pathway 43 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 779 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 179 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Spolpseudo100032800.1 Rosmarinic Acid 4CL medium pass
Spolpseudo10020810.1 Rosmarinic Acid 4CL medium pass
Spolpseudo10022360.1 Rosmarinic Acid 4CL medium pass
Spolpseudo10023730.1 Rosmarinic Acid 4CL medium pass
Spolpseudo10024170.1 Rosmarinic Acid 4CL medium pass
Spolpseudo10026600.1 Rosmarinic Acid 4CL medium pass
Spolpseudo110042970.1 Rosmarinic Acid 4CL medium pass
Spolpseudo120049460.1 Rosmarinic Acid 4CL medium pass
Spolpseudo120050530.1 Rosmarinic Acid 4CL medium pass
Spolpseudo130051730.1 Rosmarinic Acid 4CL low borderline
Spolpseudo130055120.1 Rosmarinic Acid 4CL low borderline
Spolpseudo140058390.1 Rosmarinic Acid 4CL low borderline
Spolpseudo170075550.1 Rosmarinic Acid 4CL medium pass
Spolpseudo170075590.1 Rosmarinic Acid 4CL medium pass
Spolpseudo170075610.1 Rosmarinic Acid 4CL medium pass
Spolpseudo180079330.1 Rosmarinic Acid 4CL low borderline
Spolpseudo20097580.1 Rosmarinic Acid 4CL low borderline
Spolpseudo220106880.1 Rosmarinic Acid 4CL low borderline
Spolpseudo260122700.1 Rosmarinic Acid 4CL low borderline
Spolpseudo30134550.1 Rosmarinic Acid 4CL medium pass
Spolpseudo30139730.1 Rosmarinic Acid 4CL medium pass
Spolpseudo40152550.1 Rosmarinic Acid 4CL low borderline
Spolpseudo40154400.1 Rosmarinic Acid 4CL medium pass
Spolpseudo50160060.1 Rosmarinic Acid 4CL medium pass
Spolpseudo50166220.1 Rosmarinic Acid 4CL medium pass
Spolpseudo70179360.1 Rosmarinic Acid 4CL low borderline
Spolpseudo70181890.1 Rosmarinic Acid 4CL low borderline
Spolpseudo00002120.1 Rosmarinic Acid C4H low borderline
Spolpseudo00006570.1 Rosmarinic Acid C4H medium pass
Spolpseudo00006580.1 Rosmarinic Acid C4H medium pass
Spolpseudo00006590.1 Rosmarinic Acid C4H medium pass
Spolpseudo00007360.1 Rosmarinic Acid C4H low borderline
Spolpseudo00007370.1 Rosmarinic Acid C4H medium pass
Spolpseudo00007390.1 Rosmarinic Acid C4H low borderline
Spolpseudo00010880.1 Rosmarinic Acid C4H medium pass
Spolpseudo00010900.1 Rosmarinic Acid C4H medium pass
Spolpseudo00012530.1 Rosmarinic Acid C4H low borderline
Spolpseudo00013540.1 Rosmarinic Acid C4H medium pass
Spolpseudo00015500.1 Rosmarinic Acid C4H low borderline
Spolpseudo00016000.1 Rosmarinic Acid C4H low borderline
Spolpseudo100033830.1 Rosmarinic Acid C4H low borderline
Spolpseudo100033880.1 Rosmarinic Acid C4H low borderline
Spolpseudo100033890.1 Rosmarinic Acid C4H medium pass
Spolpseudo100033900.1 Rosmarinic Acid C4H low borderline
Spolpseudo100033910.1 Rosmarinic Acid C4H low borderline
Spolpseudo100033960.1 Rosmarinic Acid C4H medium pass
Spolpseudo100034770.1 Rosmarinic Acid C4H low borderline
Spolpseudo100035300.1 Rosmarinic Acid C4H medium pass
Spolpseudo100035330.1 Rosmarinic Acid C4H low borderline
Spolpseudo10027930.1 Rosmarinic Acid C4H medium pass