PlantSME Plant secondary metabolism enzyme database

Spirodela polyrhiza (spirodela_polyrhiza)

Imported from atlas release summary for Spirodela polyrhiza.

768
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 237 19 BAHD (102) View species results
Phenylpropanoid pathway 176 11 POD (79) View species results
Alkaloid pathway 153 20 NMT (29) View species results
Flavonoid pathway 89 11 UFGT (48) View species results
Rosmarinic acid pathway 70 7 C4H (29) View species results
Steroid pathway 43 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 779 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 179 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Spolpseudo230112390.1 Alkaloid 7DLGT high pass
Spolpseudo250120670.1 Alkaloid 7DLGT low borderline
Spolpseudo250120830.1 Alkaloid 7DLGT low borderline
Spolpseudo260121850.1 Alkaloid 7DLGT medium pass
Spolpseudo260121870.1 Alkaloid 7DLGT low borderline
Spolpseudo50160130.1 Alkaloid 7DLGT medium pass
Spolpseudo50160880.1 Alkaloid 7DLGT medium pass
Spolpseudo50167020.1 Alkaloid 7DLGT low borderline
Spolpseudo10022240.1 Alkaloid 7DLH medium borderline
Spolpseudo110042880.1 Alkaloid 7DLH medium borderline
Spolpseudo140057830.1 Alkaloid 7DLH medium borderline
Spolpseudo160069160.1 Alkaloid 7DLH medium borderline
Spolpseudo30138630.1 Alkaloid 7DLH low borderline
Spolpseudo80188430.1 Alkaloid 7DLH medium borderline
Spolpseudo80188450.1 Alkaloid 7DLH medium borderline
Spolpseudo80188460.1 Alkaloid 7DLH medium borderline
Spolpseudo90192720.1 Alkaloid 7DLH medium borderline
Spolpseudo00016100.1 Alkaloid 8HGO medium borderline
Spolpseudo10020890.1 Alkaloid 8HGO medium borderline
Spolpseudo10024930.1 Alkaloid 8HGO medium borderline
Spolpseudo10024940.1 Alkaloid 8HGO low borderline
Spolpseudo150064210.1 Alkaloid 8HGO medium borderline
Spolpseudo160071670.1 Alkaloid 8HGO medium borderline
Spolpseudo170077670.1 Alkaloid 8HGO medium borderline
Spolpseudo20089750.1 Alkaloid 8HGO low borderline
Spolpseudo240118220.1 Alkaloid 8HGO low borderline
Spolpseudo40156490.1 Alkaloid 8HGO low borderline
Spolpseudo40156920.1 Alkaloid 8HGO medium pass
Spolpseudo40156930.1 Alkaloid 8HGO medium borderline
Spolpseudo40156940.1 Alkaloid 8HGO medium borderline
Spolpseudo40156950.1 Alkaloid 8HGO medium pass
Spolpseudo40156960.1 Alkaloid 8HGO medium pass
Spolpseudo40156980.1 Alkaloid 8HGO medium borderline
Spolpseudo40156990.1 Alkaloid 8HGO low borderline
Spolpseudo40157000.1 Alkaloid 8HGO medium pass
Spolpseudo40157010.1 Alkaloid 8HGO medium borderline
Spolpseudo90193920.1 Alkaloid 8HGO medium borderline
Spolpseudo160069680.1 Alkaloid ADC medium pass
Spolpseudo80186850.1 Alkaloid ADC low borderline
Spolpseudo260121220.1 Alkaloid BBE low borderline
Spolpseudo320146710.1 Alkaloid BBE medium borderline
Spolpseudo320146730.1 Alkaloid BBE medium borderline
Spolpseudo320146740.1 Alkaloid BBE medium borderline
Spolpseudo10019980.1 Alkaloid CNMT medium pass
Spolpseudo110041920.1 Alkaloid CNMT low borderline
Spolpseudo140058330.1 Alkaloid CNMT low borderline
Spolpseudo190082310.1 Alkaloid CNMT low borderline
Spolpseudo190084630.1 Alkaloid CNMT low borderline
Spolpseudo20087900.1 Alkaloid CNMT low borderline
Spolpseudo20090320.1 Alkaloid CNMT low borderline