PlantSME Plant secondary metabolism enzyme database

Spirodela polyrhiza (spirodela_polyrhiza)

Imported from atlas release summary for Spirodela polyrhiza.

768
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 237 19 BAHD (102) View species results
Phenylpropanoid pathway 176 11 POD (79) View species results
Alkaloid pathway 153 20 NMT (29) View species results
Flavonoid pathway 89 11 UFGT (48) View species results
Rosmarinic acid pathway 70 7 C4H (29) View species results
Steroid pathway 43 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 779 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 179 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Spolpseudo20093210.1 Alkaloid CNMT low borderline
Spolpseudo20097490.1 Alkaloid CNMT low borderline
Spolpseudo210104780.1 Alkaloid CNMT medium borderline
Spolpseudo80185480.1 Alkaloid CNMT low borderline
Spolpseudo00009070.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo00012430.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo00012910.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo110039710.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo140060770.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo150066090.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo170073610.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo170073620.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo170077280.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo180081440.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo20097760.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo210103480.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo210103490.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo220109620.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo230112560.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo260123960.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo70176390.1 Alkaloid CODM/T6ODM medium borderline
Spolpseudo10025090.1 Alkaloid COR medium pass
Spolpseudo150066680.1 Alkaloid COR medium pass
Spolpseudo220110850.1 Alkaloid COR medium pass
Spolpseudo130054500.1 Alkaloid CYP719 medium borderline
Spolpseudo20096380.1 Alkaloid CYP719 medium borderline
Spolpseudo50164390.1 Alkaloid CYP719 medium borderline
Spolpseudo100033830.1 Alkaloid CYP80B1 low borderline
Spolpseudo10028900.1 Alkaloid CYP80B1 medium borderline
Spolpseudo10028910.1 Alkaloid CYP80B1 medium borderline
Spolpseudo200102000.1 Alkaloid CYP80B1 medium borderline
Spolpseudo210105020.1 Alkaloid CYP80B1 medium borderline
Spolpseudo80185850.1 Alkaloid CYP80B1 medium borderline
Spolpseudo00007360.1 Alkaloid G8O/G8H medium borderline
Spolpseudo00007390.1 Alkaloid G8O/G8H medium borderline
Spolpseudo00010890.1 Alkaloid G8O/G8H medium pass
Spolpseudo00013540.1 Alkaloid G8O/G8H medium borderline
Spolpseudo10028320.1 Alkaloid G8O/G8H low borderline
Spolpseudo10029970.1 Alkaloid G8O/G8H medium borderline
Spolpseudo110040630.1 Alkaloid G8O/G8H medium borderline
Spolpseudo180079390.1 Alkaloid G8O/G8H medium borderline
Spolpseudo190085300.1 Alkaloid G8O/G8H medium borderline
Spolpseudo20097650.1 Alkaloid G8O/G8H low borderline
Spolpseudo210106510.1 Alkaloid G8O/G8H medium borderline
Spolpseudo210106530.1 Alkaloid G8O/G8H medium borderline
Spolpseudo210106570.1 Alkaloid G8O/G8H medium borderline
Spolpseudo30132400.1 Alkaloid G8O/G8H medium borderline
Spolpseudo30132450.1 Alkaloid G8O/G8H low borderline
Spolpseudo30132490.1 Alkaloid G8O/G8H medium borderline
Spolpseudo30143210.1 Alkaloid G8O/G8H low borderline