PlantSME Plant secondary metabolism enzyme database

Spirodela polyrhiza (spirodela_polyrhiza)

Imported from atlas release summary for Spirodela polyrhiza.

768
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 237 19 BAHD (102) View species results
Phenylpropanoid pathway 176 11 POD (79) View species results
Alkaloid pathway 153 20 NMT (29) View species results
Flavonoid pathway 89 11 UFGT (48) View species results
Rosmarinic acid pathway 70 7 C4H (29) View species results
Steroid pathway 43 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 779 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 179 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Spolpseudo230111600.1 Rosmarinic Acid C4H low borderline
Spolpseudo290129070.1 Rosmarinic Acid C4H low borderline
Spolpseudo290129100.1 Rosmarinic Acid C4H low borderline
Spolpseudo290130260.1 Rosmarinic Acid C4H medium pass
Spolpseudo290130270.1 Rosmarinic Acid C4H low borderline
Spolpseudo30132430.1 Rosmarinic Acid C4H low borderline
Spolpseudo30132450.1 Rosmarinic Acid C4H low borderline
Spolpseudo30132470.1 Rosmarinic Acid C4H medium pass
Spolpseudo30132490.1 Rosmarinic Acid C4H medium pass
Spolpseudo30141180.1 Rosmarinic Acid C4H low borderline
Spolpseudo40150920.1 Rosmarinic Acid C4H medium pass
Spolpseudo40153080.1 Rosmarinic Acid C4H low borderline
Spolpseudo50160460.1 Rosmarinic Acid C4H medium pass
Spolpseudo50160470.1 Rosmarinic Acid C4H medium pass
Spolpseudo50163790.1 Rosmarinic Acid C4H low borderline
Spolpseudo50164390.1 Rosmarinic Acid C4H low borderline
Spolpseudo50164430.1 Rosmarinic Acid C4H low borderline
Spolpseudo50164560.1 Rosmarinic Acid C4H low borderline
Spolpseudo50164680.1 Rosmarinic Acid C4H low borderline
Spolpseudo50164970.1 Rosmarinic Acid C4H medium pass
Spolpseudo50164990.1 Rosmarinic Acid C4H low borderline
Spolpseudo50165010.1 Rosmarinic Acid C4H low borderline
Spolpseudo50165040.1 Rosmarinic Acid C4H low borderline
Spolpseudo50165730.1 Rosmarinic Acid C4H low borderline
Spolpseudo60168760.1 Rosmarinic Acid C4H low borderline
Spolpseudo60170460.1 Rosmarinic Acid C4H medium pass
Spolpseudo60173110.1 Rosmarinic Acid C4H medium pass
Spolpseudo70177700.1 Rosmarinic Acid C4H low borderline
Spolpseudo80184800.1 Rosmarinic Acid C4H low borderline
Spolpseudo80185850.1 Rosmarinic Acid C4H low borderline
Spolpseudo80188420.1 Rosmarinic Acid C4H low borderline
Spolpseudo80188430.1 Rosmarinic Acid C4H low borderline
Spolpseudo80188450.1 Rosmarinic Acid C4H low borderline
Spolpseudo80188460.1 Rosmarinic Acid C4H low borderline
Spolpseudo80188500.1 Rosmarinic Acid C4H low borderline
Spolpseudo80189180.1 Rosmarinic Acid C4H low borderline
Spolpseudo90190880.1 Rosmarinic Acid C4H low borderline
Spolpseudo90192660.1 Rosmarinic Acid C4H low borderline
Spolpseudo120049570.1 Rosmarinic Acid CPR medium pass
Spolpseudo150065550.1 Rosmarinic Acid CPR low borderline
Spolpseudo290130680.1 Rosmarinic Acid CPR medium pass
Spolpseudo90192230.1 Rosmarinic Acid CPR medium pass
Spolpseudo260121460.1 Rosmarinic Acid HPPR medium pass
Spolpseudo260121470.1 Rosmarinic Acid HPPR medium pass
Spolpseudo10019440.1 Rosmarinic Acid PAL high pass
Spolpseudo110040000.1 Rosmarinic Acid PAL high pass
Spolpseudo150067030.1 Rosmarinic Acid PAL high pass
Spolpseudo00011710.1 Rosmarinic Acid RAS medium pass
Spolpseudo00016600.1 Rosmarinic Acid RAS medium pass
Spolpseudo00017060.1 Rosmarinic Acid RAS medium pass