PlantSME Plant secondary metabolism enzyme database

Spirodela polyrhiza (spirodela_polyrhiza)

Imported from atlas release summary for Spirodela polyrhiza.

768
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 237 19 BAHD (102) View species results
Phenylpropanoid pathway 176 11 POD (79) View species results
Alkaloid pathway 153 20 NMT (29) View species results
Flavonoid pathway 89 11 UFGT (48) View species results
Rosmarinic acid pathway 70 7 C4H (29) View species results
Steroid pathway 43 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 779 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 179 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Spolpseudo20096380.1 Steroid CYP90D1 medium borderline
Spolpseudo210103040.1 Steroid CYP90D1 low borderline
Spolpseudo230111600.1 Steroid CYP90D1 medium borderline
Spolpseudo80185850.1 Steroid CYP90D1 low borderline
Spolpseudo00012500.1 Steroid DET2 low borderline
Spolpseudo170076240.1 Steroid DET2 low borderline
Spolpseudo230112050.1 Steroid DET2 medium pass
Spolpseudo230113340.1 Steroid DET2 low borderline
Spolpseudo230113360.1 Steroid DET2 low borderline
Spolpseudo30140710.1 Steroid DET2 low borderline
Spolpseudo10023820.1 Steroid DWF1 medium pass
Spolpseudo00007370.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo00008410.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo00010880.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo00016000.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo00017140.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo00017630.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo100033900.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo100033960.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo100034770.1 Steroid DWF4/CYP90B1 medium borderline
Spolpseudo10028200.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo10028230.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo10028240.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo10028250.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo10028280.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo10028300.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo10028330.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo10028900.1 Steroid DWF4/CYP90B1 medium borderline
Spolpseudo10029970.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo110040570.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo110040630.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo110042880.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo120050400.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo130053470.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo150067350.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo160069160.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo160070580.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo20089630.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo20092420.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo20094640.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo20096100.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo20096110.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo210106530.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo210106570.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo290129070.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo290129080.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo290129090.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo290129100.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo30132400.1 Steroid DWF4/CYP90B1 low borderline
Spolpseudo40150920.1 Steroid DWF4/CYP90B1 low borderline