PlantSME Plant secondary metabolism enzyme database

Spirodela polyrhiza (spirodela_polyrhiza)

Imported from atlas release summary for Spirodela polyrhiza.

982
Candidate Protein Records
768
Pathway-Level Records
1942
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 237 19 BAHD (102) View species results
Phenylpropanoid pathway 176 11 POD (79) View species results
Alkaloid pathway 153 20 NMT (29) View species results
Flavonoid pathway 89 11 UFGT (48) View species results
Rosmarinic acid pathway 70 7 C4H (29) View species results
Steroid pathway 43 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 779 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 179 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Spolpseudo280126970.1 Phenylpropanoid CCR medium pass
Spolpseudo280126990.1 Phenylpropanoid CCR medium borderline
Spolpseudo50165910.1 Phenylpropanoid CCR medium borderline
Spolpseudo80187690.1 Phenylpropanoid CCR medium pass
Spolpseudo80189220.1 Phenylpropanoid CCR medium borderline
Spolpseudo170074320.1 Phenylpropanoid CCoAOMT medium pass
Spolpseudo10026850.1 Phenylpropanoid COMT medium pass
Spolpseudo10026860.1 Phenylpropanoid COMT medium pass
Spolpseudo10026870.1 Phenylpropanoid COMT medium pass
Spolpseudo10026880.1 Phenylpropanoid COMT medium pass
Spolpseudo10026890.1 Phenylpropanoid COMT medium pass
Spolpseudo10026900.1 Phenylpropanoid COMT medium pass
Spolpseudo10026910.1 Phenylpropanoid COMT medium pass
Spolpseudo110039100.1 Phenylpropanoid COMT low borderline
Spolpseudo170077060.1 Phenylpropanoid COMT low borderline
Spolpseudo240118160.1 Phenylpropanoid COMT low borderline
Spolpseudo00017030.1 Phenylpropanoid CSE medium pass
Spolpseudo100036540.1 Phenylpropanoid CSE medium pass
Spolpseudo10019240.1 Phenylpropanoid CSE medium pass
Spolpseudo10021950.1 Phenylpropanoid CSE medium pass
Spolpseudo10021980.1 Phenylpropanoid CSE low borderline
Spolpseudo10025140.1 Phenylpropanoid CSE medium pass
Spolpseudo10029630.1 Phenylpropanoid CSE medium pass
Spolpseudo110038780.1 Phenylpropanoid CSE medium pass
Spolpseudo110038790.1 Phenylpropanoid CSE low borderline
Spolpseudo110039090.1 Phenylpropanoid CSE medium pass
Spolpseudo110039630.1 Phenylpropanoid CSE low borderline
Spolpseudo110039640.1 Phenylpropanoid CSE low borderline
Spolpseudo120044400.1 Phenylpropanoid CSE medium pass
Spolpseudo150066640.1 Phenylpropanoid CSE medium pass
Spolpseudo150067400.1 Phenylpropanoid CSE medium pass
Spolpseudo160068540.1 Phenylpropanoid CSE medium pass
Spolpseudo190082930.1 Phenylpropanoid CSE medium pass
Spolpseudo190085640.1 Phenylpropanoid CSE medium pass
Spolpseudo190085660.1 Phenylpropanoid CSE medium pass
Spolpseudo20087850.1 Phenylpropanoid CSE medium pass
Spolpseudo20091020.1 Phenylpropanoid CSE medium pass
Spolpseudo20092660.1 Phenylpropanoid CSE medium pass
Spolpseudo210103230.1 Phenylpropanoid CSE medium pass
Spolpseudo230114080.1 Phenylpropanoid CSE medium pass
Spolpseudo250119840.1 Phenylpropanoid CSE medium pass
Spolpseudo260123230.1 Phenylpropanoid CSE medium pass
Spolpseudo40151450.1 Phenylpropanoid CSE medium pass
Spolpseudo50160960.1 Phenylpropanoid CSE medium pass
Spolpseudo50161830.1 Phenylpropanoid CSE medium pass
Spolpseudo60168650.1 Phenylpropanoid CSE medium pass
Spolpseudo60168660.1 Phenylpropanoid CSE medium pass
Spolpseudo60172090.1 Phenylpropanoid CSE medium pass
Spolpseudo70175070.1 Phenylpropanoid CSE medium pass
Spolpseudo80182490.1 Phenylpropanoid CSE low borderline