Spirodela polyrhiza (spirodela_polyrhiza)
Imported from atlas release summary for Spirodela polyrhiza.
982
Candidate Protein Records
768
Pathway-Level Records
1942
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1942
Family-Level Calls
BAHD
7.11%
C3'H/CYP98A
6.59%
C4H
6.23%
CYP76
4.53%
4CL
4.17%
POD
4.12%
IFS
3.76%
UGT
3.3%
Other Families
60.2%
More Families (94)
T3O
63
3.24%
UFGT
56
2.88%
BR6OX2/CYP85A2
56
2.88%
7DLGT
51
2.63%
DWF4/CYP90B1
51
2.63%
NMT
47
2.42%
F3'H/CYP75B
46
2.37%
STR
44
2.27%
F3H
36
1.85%
CSE
34
1.75%
G8O/G8H
29
1.49%
CAD
26
1.34%
TRI/TRII
25
1.29%
SMT1/SMT2/SMT3
24
1.24%
SLS
23
1.18%
IFR
22
1.13%
HCT
22
1.13%
PYKS
21
1.08%
ANR
21
1.08%
8HGO
20
1.03%
CCR
19
0.98%
RAS
19
0.98%
CYP71
19
0.98%
FNS
18
0.93%
CODM/T6ODM
17
0.88%
CAS
17
0.88%
TPS
17
0.88%
GES
16
0.82%
GS
15
0.77%
SGD
14
0.72%
IO
13
0.67%
LAC
13
0.67%
CYP90D1
13
0.67%
H6H
12
0.62%
PMT
11
0.57%
CNMT
11
0.57%
NCS
10
0.51%
COMT
10
0.51%
7DLH
9
0.46%
PAL
9
0.46%
TYDC_DDC
8
0.41%
F3'5'H/CYP75A
8
0.41%
BR6OX1/CYP85A1
8
0.41%
16OMT
7
0.36%
T16H
7
0.36%
CYP80B1
6
0.31%
DFR
6
0.31%
TAT
6
0.31%
CPD/CYP90A1
6
0.31%
DET2
6
0.31%
TDC
5
0.26%
FPPS
5
0.26%
BBE
4
0.21%
F5H/CYP84A
4
0.21%
CPR
4
0.21%
SQS/FDFT1
4
0.21%
MVD
4
0.21%
AACT
4
0.21%
MVK
4
0.21%
COR
3
0.15%
CYP719
3
0.15%
CHS
3
0.15%
FK
3
0.15%
CYP51G1
3
0.15%
SMO1/SMO2
3
0.15%
LAMT
2
0.1%
ADC
2
0.1%
ISY
2
0.1%
XMT_MXMT_DXMT
2
0.1%
ANS/LDOX
2
0.1%
CHI
2
0.1%
HPPR
2
0.1%
ROT3/CYP90C1
2
0.1%
DWF7
2
0.1%
SQE
2
0.1%
HDS/IspG
2
0.1%
HMGS
2
0.1%
GGPPS
2
0.1%
HDR/IspH
2
0.1%
PMK
2
0.1%
DXS
2
0.1%
MCT/IspD
2
0.1%
MPO
1
0.05%
FLS
1
0.05%
CCoAOMT
1
0.05%
DWF1
1
0.05%
DWF5
1
0.05%
CPI1
1
0.05%
HYD1
1
0.05%
DXR
1
0.05%
MDS/IspF
1
0.05%
HMGR
1
0.05%
CMK/IspE
1
0.05%
IDI
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 237 | 19 | BAHD (102) | View species results |
| Phenylpropanoid pathway | 176 | 11 | POD (79) | View species results |
| Alkaloid pathway | 153 | 20 | NMT (29) | View species results |
| Flavonoid pathway | 89 | 11 | UFGT (48) | View species results |
| Rosmarinic acid pathway | 70 | 7 | C4H (29) | View species results |
| Steroid pathway | 43 | 12 | CAS (16) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 779 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 179 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Spolpseudo170077060.1 | Alkaloid | NMT | medium | borderline |
| Spolpseudo170077120.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo20089550.1 | Alkaloid | NMT | low | borderline |
| Spolpseudo20089570.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo210103000.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo210104770.1 | Alkaloid | NMT | low | borderline |
| Spolpseudo220107770.1 | Alkaloid | NMT | medium | borderline |
| Spolpseudo220107790.1 | Alkaloid | NMT | medium | borderline |
| Spolpseudo220107810.1 | Alkaloid | NMT | medium | borderline |
| Spolpseudo220107820.1 | Alkaloid | NMT | medium | borderline |
| Spolpseudo240117600.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo240118710.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo280127400.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo30134160.1 | Alkaloid | NMT | medium | borderline |
| Spolpseudo30134350.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo30135670.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo310146310.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo40148270.1 | Alkaloid | NMT | low | borderline |
| Spolpseudo40150330.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo40152150.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo50165170.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo50167040.1 | Alkaloid | NMT | medium | borderline |
| Spolpseudo60168230.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo60168620.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo70176300.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo80183150.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo80189030.1 | Alkaloid | NMT | medium | borderline |
| Spolpseudo90193340.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo90194930.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo90195110.1 | Alkaloid | NMT | medium | pass |
| Spolpseudo00011710.1 | Alkaloid | PMT | medium | pass |
| Spolpseudo00017060.1 | Alkaloid | PMT | low | borderline |
| Spolpseudo110037630.1 | Alkaloid | PMT | medium | pass |
| Spolpseudo120045210.1 | Alkaloid | PMT | medium | borderline |
| Spolpseudo120048880.1 | Alkaloid | PMT | low | borderline |
| Spolpseudo180081170.1 | Alkaloid | PMT | medium | pass |
| Spolpseudo260122690.1 | Alkaloid | PMT | medium | borderline |
| Spolpseudo300144840.1 | Alkaloid | PMT | medium | pass |
| Spolpseudo30141020.1 | Alkaloid | PMT | low | borderline |
| Spolpseudo40153570.1 | Alkaloid | PMT | medium | pass |
| Spolpseudo90195220.1 | Alkaloid | PMT | medium | pass |
| Spolpseudo00004700.1 | Alkaloid | PYKS | low | borderline |
| Spolpseudo00010940.1 | Alkaloid | PYKS | low | borderline |
| Spolpseudo00012540.1 | Alkaloid | PYKS | low | borderline |
| Spolpseudo100031800.1 | Alkaloid | PYKS | low | borderline |
| Spolpseudo10019840.1 | Alkaloid | PYKS | low | borderline |
| Spolpseudo10019850.1 | Alkaloid | PYKS | low | borderline |
| Spolpseudo10021930.1 | Alkaloid | PYKS | low | borderline |
| Spolpseudo10025320.1 | Alkaloid | PYKS | high | pass |
| Spolpseudo110041930.1 | Alkaloid | PYKS | low | borderline |