Suaeda aralocaspica (suaeda_aralocaspica)
Imported from atlas release summary for Suaeda aralocaspica.
1027
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1027
Candidate Genes
BAHD
6.58%
C3'H/CYP98A
5.56%
POD
5.29%
C4H
5.13%
UGT
4.46%
7DLGT
4.23%
UFGT
4.15%
4CL
3.88%
Other Families
60.73%
More Families (97)
T3O
90
3.52%
IFS
89
3.48%
CYP76
84
3.29%
NMT
74
2.9%
F3H
63
2.47%
DWF4/CYP90B1
58
2.27%
CODM/T6ODM
45
1.76%
F3'H/CYP75B
45
1.76%
BR6OX2/CYP85A2
45
1.76%
STR
42
1.64%
TRI/TRII
37
1.45%
SMT1/SMT2/SMT3
35
1.37%
HCT
33
1.29%
CYP71
32
1.25%
COMT
29
1.14%
CAD
29
1.14%
RAS
29
1.14%
H6H
27
1.06%
PMT
24
0.94%
PYKS
24
0.94%
LAC
24
0.94%
CSE
22
0.86%
IFR
21
0.82%
BBE
20
0.78%
SGD
20
0.78%
T16H
18
0.7%
16OMT
18
0.7%
ANR
18
0.7%
CYP90D1
18
0.7%
CAS
18
0.7%
FPPS
18
0.7%
SLS
17
0.67%
F3'5'H/CYP75A
17
0.67%
G8O/G8H
16
0.63%
GS
16
0.63%
CCR
16
0.63%
TPS
14
0.55%
GES
13
0.51%
BR6OX1/CYP85A1
13
0.51%
7DLH
12
0.47%
CYP51G1
12
0.47%
CNMT
11
0.43%
FNS
11
0.43%
CCoAOMT
11
0.43%
LAMT
10
0.39%
CPD/CYP90A1
10
0.39%
8HGO
9
0.35%
IO
9
0.35%
COR
9
0.35%
F5H/CYP84A
9
0.35%
MPO
8
0.31%
CHS
8
0.31%
DFR
8
0.31%
TAT
7
0.27%
XMT_MXMT_DXMT
6
0.23%
CPR
6
0.23%
AACT
6
0.23%
CYP80F1
5
0.2%
NCS
5
0.2%
ANS/LDOX
5
0.2%
HPPR
5
0.2%
ROT3/CYP90C1
5
0.2%
SMO1/SMO2
5
0.2%
MVD
5
0.2%
ISY
4
0.16%
CYP719
4
0.16%
CHI
4
0.16%
SQS/FDFT1
4
0.16%
DWF7
4
0.16%
HYD1
4
0.16%
HMGR
4
0.16%
MVK
4
0.16%
GGPPS
4
0.16%
TYDC_DDC
3
0.12%
TDC
3
0.12%
FLS
3
0.12%
PAL
3
0.12%
DET2
3
0.12%
SQE
3
0.12%
DWF1
3
0.12%
CMK/IspE
3
0.12%
DXS
3
0.12%
PMK
3
0.12%
CYP80B1
2
0.08%
HMGS
2
0.08%
MCT/IspD
2
0.08%
ADC
1
0.04%
6OMT_4OMT_SOMT
1
0.04%
DWF5
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
MDS/IspF
1
0.04%
IDI
1
0.04%
GPPS
1
0.04%
DXR
1
0.04%
HDR/IspH
1
0.04%
HDS/IspG
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 306 | 19 | BAHD (125) | View species results |
| Phenylpropanoid pathway | 250 | 11 | POD (122) | View species results |
| Alkaloid pathway | 203 | 17 | 7DLGT (43) | View species results |
| Flavonoid pathway | 139 | 9 | UFGT (96) | View species results |
| Rosmarinic acid pathway | 79 | 7 | C4H (30) | View species results |
| Steroid pathway | 50 | 11 | SMT1/SMT2/SMT3 (20) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 883 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 230 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Suaeda_aralocaspica_GOSA_00000041-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00002014-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00002393-RA | Alkaloid | PMT | medium | borderline |
| Suaeda_aralocaspica_GOSA_00003706-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00003943-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00005300-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00005598-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00008089-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00008090-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00008091-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00009056-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00009362-RA | Alkaloid | PMT | medium | borderline |
| Suaeda_aralocaspica_GOSA_00015815-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00016480-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00017339-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00017625-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00018275-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00018276-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00020027-RA | Alkaloid | PMT | medium | borderline |
| Suaeda_aralocaspica_GOSA_00025293-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00025830-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00026110-RA | Alkaloid | PMT | low | borderline |
| Suaeda_aralocaspica_GOSA_00026776-RA | Alkaloid | PMT | medium | pass |
| Suaeda_aralocaspica_GOSA_00028546-RA | Alkaloid | PMT | medium | borderline |