PlantSME Plant secondary metabolism enzyme database

Syntrichia caninervis (syntrichia_caninervis)

Imported from atlas release summary for Syntrichia caninervis.

634
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (83) View species results
Terpenoid pathway 166 20 BAHD (65) View species results
Alkaloid pathway 121 18 NMT (21) View species results
Flavonoid pathway 74 11 UFGT (23) View species results
Rosmarinic acid pathway 67 7 C4H (23) View species results
Steroid pathway 36 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 665 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 105 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Scan01G0009680.1 Rosmarinic Acid 4CL low borderline
Scan02G0006680.1 Rosmarinic Acid 4CL low borderline
Scan02G0007170.1 Rosmarinic Acid 4CL medium pass
Scan02G0010170.1 Rosmarinic Acid 4CL medium pass
Scan03G0004550.1 Rosmarinic Acid 4CL low borderline
Scan03G0008790.1 Rosmarinic Acid 4CL medium pass
Scan03G0011010.1 Rosmarinic Acid 4CL low borderline
Scan04G0009980.1 Rosmarinic Acid 4CL low borderline
Scan06G0002320.1 Rosmarinic Acid 4CL low borderline
Scan06G0008380.1 Rosmarinic Acid 4CL medium pass
Scan06G0009480.1 Rosmarinic Acid 4CL medium pass
Scan06G0011130.1 Rosmarinic Acid 4CL medium pass
Scan07G0002090.1 Rosmarinic Acid 4CL medium pass
Scan08G0010550.1 Rosmarinic Acid 4CL low borderline
Scan08G0010550.2 Rosmarinic Acid 4CL low borderline
Scan09G0001560.1 Rosmarinic Acid 4CL low borderline
Scan09G0008190.1 Rosmarinic Acid 4CL medium pass
Scan10G0010800.2 Rosmarinic Acid 4CL low borderline
Scan10G0010800.3 Rosmarinic Acid 4CL low borderline
Scan10G0013600.1 Rosmarinic Acid 4CL medium pass
Scan10G0013600.2 Rosmarinic Acid 4CL medium pass
Scan10G0014690.1 Rosmarinic Acid 4CL medium pass
Scan10G0014700.1 Rosmarinic Acid 4CL medium pass
Scan10G0014960.1 Rosmarinic Acid 4CL low borderline
Scan10G0014970.1 Rosmarinic Acid 4CL medium pass
Scan10G0014980.1 Rosmarinic Acid 4CL medium pass
Scan10G0014990.1 Rosmarinic Acid 4CL medium pass
Scan11G0012780.1 Rosmarinic Acid 4CL medium pass
Scan11G0013590.1 Rosmarinic Acid 4CL low borderline
Scan12G0013530.1 Rosmarinic Acid 4CL medium pass
Scan12G0015370.1 Rosmarinic Acid 4CL medium pass
Scan12G0015380.1 Rosmarinic Acid 4CL medium pass
Scan12G0015390.1 Rosmarinic Acid 4CL medium pass
Scan12G0018900.1 Rosmarinic Acid 4CL medium pass
Scan01G0002140.1 Rosmarinic Acid C4H low borderline
Scan01G0003270.1 Rosmarinic Acid C4H low borderline
Scan01G0005320.1 Rosmarinic Acid C4H medium pass
Scan01G0005740.1 Rosmarinic Acid C4H low borderline
Scan01G0005750.1 Rosmarinic Acid C4H low borderline
Scan01G0005850.1 Rosmarinic Acid C4H medium pass
Scan01G0006930.1 Rosmarinic Acid C4H low borderline
Scan01G0007360.1 Rosmarinic Acid C4H low borderline
Scan01G0007980.1 Rosmarinic Acid C4H low borderline
Scan01G0007980.2 Rosmarinic Acid C4H low borderline
Scan02G0000980.1 Rosmarinic Acid C4H low borderline
Scan02G0001580.1 Rosmarinic Acid C4H low borderline
Scan02G0002760.1 Rosmarinic Acid C4H low borderline
Scan02G0003180.1 Rosmarinic Acid C4H low borderline
Scan02G0006520.1 Rosmarinic Acid C4H medium pass
Scan02G0010550.1 Rosmarinic Acid C4H medium pass