PlantSME Plant secondary metabolism enzyme database

Syntrichia caninervis (syntrichia_caninervis)

Imported from atlas release summary for Syntrichia caninervis.

634
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (83) View species results
Terpenoid pathway 166 20 BAHD (65) View species results
Alkaloid pathway 121 18 NMT (21) View species results
Flavonoid pathway 74 11 UFGT (23) View species results
Rosmarinic acid pathway 67 7 C4H (23) View species results
Steroid pathway 36 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 665 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 105 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Scan11G0007630.1 Alkaloid BBE low borderline
Scan12G0011370.1 Alkaloid BBE low borderline
Scan12G0015980.1 Alkaloid BBE low borderline
Scan02G0002080.2 Alkaloid CNMT low borderline
Scan04G0009880.1 Alkaloid CNMT low borderline
Scan09G0011490.1 Alkaloid CNMT medium borderline
Scan09G0014490.1 Alkaloid CNMT low borderline
Scan10G0007660.1 Alkaloid CNMT low borderline
Scan03G0004300.1 Alkaloid CODM/T6ODM medium borderline
Scan06G0001790.1 Alkaloid CODM/T6ODM medium borderline
Scan06G0003150.1 Alkaloid CODM/T6ODM medium borderline
Scan07G0004160.1 Alkaloid CODM/T6ODM medium borderline
Scan07G0005780.1 Alkaloid CODM/T6ODM low borderline
Scan07G0005780.2 Alkaloid CODM/T6ODM low borderline
Scan08G0001000.1 Alkaloid CODM/T6ODM medium borderline
Scan08G0003300.1 Alkaloid CODM/T6ODM medium borderline
Scan08G0003340.1 Alkaloid CODM/T6ODM medium borderline
Scan08G0008900.1 Alkaloid CODM/T6ODM medium borderline
Scan08G0009910.1 Alkaloid CODM/T6ODM medium borderline
Scan08G0010410.1 Alkaloid CODM/T6ODM medium borderline
Scan09G0006550.1 Alkaloid CODM/T6ODM medium borderline
Scan09G0010770.1 Alkaloid CODM/T6ODM medium borderline
Scan10G0005540.1 Alkaloid CODM/T6ODM medium borderline
Scan01G0002850.1 Alkaloid COR medium pass
Scan01G0006620.1 Alkaloid COR medium pass
Scan02G0003400.1 Alkaloid COR medium pass
Scan06G0000700.1 Alkaloid COR medium pass
Scan06G0004900.1 Alkaloid COR low borderline
Scan08G0000800.1 Alkaloid COR medium pass
Scan10G0011950.1 Alkaloid COR medium pass
Scan11G0001870.1 Alkaloid COR medium pass
Scan12G0009130.1 Alkaloid COR medium pass
Scan05G0003280.1 Alkaloid CYP719 medium borderline
Scan09G0007950.1 Alkaloid CYP719 medium borderline
Scan12G0002380.1 Alkaloid CYP719 low borderline
Scan02G0000980.1 Alkaloid CYP80B1 medium borderline
Scan10G0005360.1 Alkaloid CYP80B1 medium borderline
Scan12G0010500.1 Alkaloid CYP80B1 medium pass
Scan08G0002480.1 Alkaloid CYP80F1 medium borderline
Scan03G0006370.1 Alkaloid G8O/G8H medium borderline
Scan04G0011030.1 Alkaloid G8O/G8H medium borderline
Scan05G0002190.1 Alkaloid G8O/G8H medium borderline
Scan05G0006650.1 Alkaloid G8O/G8H medium borderline
Scan05G0008250.1 Alkaloid G8O/G8H medium borderline
Scan06G0007730.1 Alkaloid G8O/G8H low borderline
Scan06G0011440.1 Alkaloid G8O/G8H medium borderline
Scan08G0001230.1 Alkaloid G8O/G8H medium borderline
Scan08G0006490.1 Alkaloid G8O/G8H low borderline
Scan08G0011820.1 Alkaloid G8O/G8H medium borderline
Scan09G0000050.1 Alkaloid G8O/G8H medium borderline