PlantSME Plant secondary metabolism enzyme database

Syntrichia caninervis (syntrichia_caninervis)

Imported from atlas release summary for Syntrichia caninervis.

634
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (83) View species results
Terpenoid pathway 166 20 BAHD (65) View species results
Alkaloid pathway 121 18 NMT (21) View species results
Flavonoid pathway 74 11 UFGT (23) View species results
Rosmarinic acid pathway 67 7 C4H (23) View species results
Steroid pathway 36 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 665 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 105 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Scan09G0014910.1 Alkaloid G8O/G8H medium borderline
Scan09G0015540.1 Alkaloid G8O/G8H medium borderline
Scan10G0008190.1 Alkaloid G8O/G8H low borderline
Scan10G0012240.1 Alkaloid G8O/G8H medium borderline
Scan10G0012300.1 Alkaloid G8O/G8H medium borderline
Scan10G0015290.1 Alkaloid G8O/G8H low borderline
Scan12G0003930.1 Alkaloid G8O/G8H medium borderline
Scan12G0008240.1 Alkaloid G8O/G8H medium borderline
Scan12G0011070.1 Alkaloid G8O/G8H medium borderline
Scan12G0011500.1 Alkaloid G8O/G8H medium borderline
Scan12G0011500.2 Alkaloid G8O/G8H medium borderline
Scan12G0014300.1 Alkaloid G8O/G8H medium borderline
Scan12G0015150.1 Alkaloid G8O/G8H medium borderline
Scan11G0002120.1 Alkaloid GES medium pass
Scan11G0002150.1 Alkaloid GES low borderline
Scan01G0001420.1 Alkaloid GS low borderline
Scan01G0004340.1 Alkaloid GS low borderline
Scan02G0006690.1 Alkaloid GS high pass
Scan03G0009260.1 Alkaloid GS low borderline
Scan04G0002290.1 Alkaloid GS low borderline
Scan04G0006540.1 Alkaloid GS medium pass
Scan05G0006870.1 Alkaloid GS low borderline
Scan06G0000740.1 Alkaloid GS low borderline
Scan06G0005590.1 Alkaloid GS low borderline
Scan07G0011270.1 Alkaloid GS low borderline
Scan07G0011710.1 Alkaloid GS medium pass
Scan07G0013300.1 Alkaloid GS medium pass
Scan08G0001150.1 Alkaloid GS low borderline
Scan08G0001150.2 Alkaloid GS low borderline
Scan08G0001180.1 Alkaloid GS low borderline
Scan09G0007320.1 Alkaloid GS high pass
Scan09G0008090.1 Alkaloid GS medium pass
Scan09G0009240.1 Alkaloid GS low borderline
Scan09G0011130.1 Alkaloid GS low borderline
Scan10G0000850.1 Alkaloid GS low borderline
Scan10G0009660.1 Alkaloid GS low borderline
Scan11G0005680.1 Alkaloid GS low borderline
Scan11G0010890.1 Alkaloid GS medium pass
Scan11G0013700.1 Alkaloid GS low borderline
Scan12G0003260.1 Alkaloid GS low borderline
Scan12G0003500.1 Alkaloid GS medium pass
Scan12G0008000.1 Alkaloid GS low borderline
Scan03G0007260.1 Alkaloid H6H medium borderline
Scan05G0005560.1 Alkaloid H6H low borderline
Scan06G0008910.1 Alkaloid H6H medium borderline
Scan06G0012010.1 Alkaloid H6H medium borderline
Scan08G0005830.1 Alkaloid H6H medium pass
Scan08G0011870.1 Alkaloid H6H medium pass
Scan08G0011880.1 Alkaloid H6H medium pass
Scan10G0015670.1 Alkaloid H6H medium borderline