PlantSME Plant secondary metabolism enzyme database

Syntrichia caninervis (syntrichia_caninervis)

Imported from atlas release summary for Syntrichia caninervis.

634
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (83) View species results
Terpenoid pathway 166 20 BAHD (65) View species results
Alkaloid pathway 121 18 NMT (21) View species results
Flavonoid pathway 74 11 UFGT (23) View species results
Rosmarinic acid pathway 67 7 C4H (23) View species results
Steroid pathway 36 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 665 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 105 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Scan08G0011840.1 Rosmarinic Acid C4H low borderline
Scan09G0000050.1 Rosmarinic Acid C4H low borderline
Scan09G0007950.1 Rosmarinic Acid C4H low borderline
Scan09G0014140.1 Rosmarinic Acid C4H low borderline
Scan09G0014420.1 Rosmarinic Acid C4H low borderline
Scan09G0014910.1 Rosmarinic Acid C4H low borderline
Scan10G0005360.1 Rosmarinic Acid C4H low borderline
Scan10G0008190.1 Rosmarinic Acid C4H medium pass
Scan10G0008240.1 Rosmarinic Acid C4H medium pass
Scan10G0012250.1 Rosmarinic Acid C4H low borderline
Scan10G0012300.1 Rosmarinic Acid C4H medium pass
Scan11G0001440.1 Rosmarinic Acid C4H low borderline
Scan11G0002970.1 Rosmarinic Acid C4H medium pass
Scan11G0010710.1 Rosmarinic Acid C4H low borderline
Scan11G0014010.1 Rosmarinic Acid C4H low borderline
Scan12G0000260.1 Rosmarinic Acid C4H low borderline
Scan12G0001290.1 Rosmarinic Acid C4H low borderline
Scan12G0003740.1 Rosmarinic Acid C4H low borderline
Scan12G0003930.1 Rosmarinic Acid C4H medium pass
Scan12G0008240.1 Rosmarinic Acid C4H low borderline
Scan12G0011070.1 Rosmarinic Acid C4H low borderline
Scan12G0011500.2 Rosmarinic Acid C4H medium pass
Scan12G0012660.1 Rosmarinic Acid C4H low borderline
Scan12G0014300.1 Rosmarinic Acid C4H low borderline
Scan12G0014920.1 Rosmarinic Acid C4H low borderline
Scan12G0015150.1 Rosmarinic Acid C4H medium pass
Scan12G0019220.1 Rosmarinic Acid C4H low borderline
Scan12G0019500.1 Rosmarinic Acid C4H medium pass
Scan13G0000950.1 Rosmarinic Acid C4H low borderline
Scan13G0001410.1 Rosmarinic Acid C4H medium pass
Scan01G0008980.1 Rosmarinic Acid CPR medium pass
Scan04G0011080.1 Rosmarinic Acid CPR medium pass
Scan09G0015280.1 Rosmarinic Acid CPR medium pass
Scan11G0003460.1 Rosmarinic Acid CPR medium pass
Scan11G0014180.1 Rosmarinic Acid CPR low borderline
Scan10G0013650.1 Rosmarinic Acid HPPR medium pass
Scan02G0004540.1 Rosmarinic Acid PAL low borderline
Scan02G0004720.1 Rosmarinic Acid PAL high pass
Scan07G0006770.1 Rosmarinic Acid PAL low borderline
Scan07G0012190.1 Rosmarinic Acid PAL high pass
Scan08G0006930.1 Rosmarinic Acid PAL low borderline
Scan09G0001170.1 Rosmarinic Acid PAL high pass
Scan09G0005210.1 Rosmarinic Acid PAL medium pass
Scan09G0013280.1 Rosmarinic Acid PAL high pass
Scan11G0008360.1 Rosmarinic Acid PAL low borderline
Scan12G0000350.1 Rosmarinic Acid PAL high pass
Scan12G0000370.1 Rosmarinic Acid PAL high pass
Scan12G0003170.1 Rosmarinic Acid PAL high pass
Scan12G0009850.1 Rosmarinic Acid PAL medium pass
Scan01G0001330.1 Rosmarinic Acid RAS medium pass