PlantSME Plant secondary metabolism enzyme database

Syntrichia caninervis (syntrichia_caninervis)

Imported from atlas release summary for Syntrichia caninervis.

634
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (83) View species results
Terpenoid pathway 166 20 BAHD (65) View species results
Alkaloid pathway 121 18 NMT (21) View species results
Flavonoid pathway 74 11 UFGT (23) View species results
Rosmarinic acid pathway 67 7 C4H (23) View species results
Steroid pathway 36 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 665 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 105 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Scan12G0019220.1 Terpenoid CYP76 medium borderline
Scan12G0019500.1 Terpenoid CYP76 medium borderline
Scan13G0000950.1 Terpenoid CYP76 low borderline
Scan04G0006840.1 Terpenoid DXR high pass
Scan11G0004470.1 Terpenoid DXR high pass
Scan01G0006110.1 Terpenoid DXS medium pass
Scan05G0000560.1 Terpenoid DXS low borderline
Scan07G0008020.1 Terpenoid DXS medium pass
Scan07G0002200.1 Terpenoid FPPS medium pass
Scan11G0006220.1 Terpenoid FPPS medium pass
Scan03G0000730.1 Terpenoid GGPPS low borderline
Scan06G0003380.1 Terpenoid GGPPS medium borderline
Scan06G0004770.1 Terpenoid GGPPS medium borderline
Scan07G0003210.1 Terpenoid GGPPS medium borderline
Scan08G0010500.1 Terpenoid GGPPS medium borderline
Scan07G0003190.1 Terpenoid GPPS low borderline
Scan04G0001810.1 Terpenoid HDR/IspH high pass
Scan11G0015120.1 Terpenoid HDR/IspH medium pass
Scan02G0005840.1 Terpenoid HDS/IspG high pass
Scan06G0008370.1 Terpenoid HDS/IspG high pass
Scan01G0005500.1 Terpenoid HMGR medium pass
Scan08G0005360.1 Terpenoid HMGS high pass
Scan07G0005950.1 Terpenoid IDI medium pass
Scan03G0009450.1 Terpenoid MCT/IspD high pass
Scan05G0005320.1 Terpenoid MCT/IspD high pass
Scan08G0004100.1 Terpenoid MCT/IspD low borderline
Scan10G0001400.1 Terpenoid MDS/IspF high pass
Scan12G0010400.1 Terpenoid MDS/IspF low borderline
Scan03G0007640.1 Terpenoid MVD low borderline
Scan03G0008160.1 Terpenoid MVD low borderline
Scan08G0002600.1 Terpenoid MVD medium pass
Scan05G0003360.1 Terpenoid MVK medium pass
Scan05G0007040.1 Terpenoid MVK low borderline
Scan08G0003020.1 Terpenoid MVK low borderline
Scan08G0011200.1 Terpenoid MVK low borderline
Scan12G0012050.1 Terpenoid MVK low borderline
Scan08G0010520.1 Terpenoid PMK medium pass
Scan11G0002120.1 Terpenoid TPS medium pass
Scan11G0002150.1 Terpenoid TPS medium pass
Scan01G0002860.1 Terpenoid UGT medium pass
Scan01G0003320.1 Terpenoid UGT medium pass
Scan02G0002700.1 Terpenoid UGT low borderline
Scan02G0006020.1 Terpenoid UGT low borderline
Scan02G0007640.1 Terpenoid UGT low borderline
Scan02G0007660.1 Terpenoid UGT medium pass
Scan02G0007680.1 Terpenoid UGT medium pass
Scan03G0010440.1 Terpenoid UGT medium pass
Scan04G0001910.1 Terpenoid UGT medium pass
Scan04G0001910.2 Terpenoid UGT medium pass
Scan04G0002010.1 Terpenoid UGT medium pass