PlantSME Plant secondary metabolism enzyme database

Syntrichia caninervis (syntrichia_caninervis)

Imported from atlas release summary for Syntrichia caninervis.

634
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (83) View species results
Terpenoid pathway 166 20 BAHD (65) View species results
Alkaloid pathway 121 18 NMT (21) View species results
Flavonoid pathway 74 11 UFGT (23) View species results
Rosmarinic acid pathway 67 7 C4H (23) View species results
Steroid pathway 36 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 665 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 105 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Scan12G0001290.1 Flavonoid IFS low borderline
Scan12G0003740.1 Flavonoid IFS medium borderline
Scan12G0010500.1 Flavonoid IFS low borderline
Scan12G0011500.2 Flavonoid IFS medium borderline
Scan12G0012660.1 Flavonoid IFS medium borderline
Scan12G0014920.1 Flavonoid IFS medium borderline
Scan02G0004540.1 Flavonoid PAL low borderline
Scan02G0004720.1 Flavonoid PAL high pass
Scan07G0006770.1 Flavonoid PAL low borderline
Scan07G0012190.1 Flavonoid PAL high pass
Scan08G0006930.1 Flavonoid PAL low borderline
Scan09G0001170.1 Flavonoid PAL high pass
Scan09G0005210.1 Flavonoid PAL medium pass
Scan09G0013280.1 Flavonoid PAL high pass
Scan11G0008360.1 Flavonoid PAL low borderline
Scan12G0000350.1 Flavonoid PAL high pass
Scan12G0000370.1 Flavonoid PAL high pass
Scan12G0003170.1 Flavonoid PAL high pass
Scan12G0009850.1 Flavonoid PAL medium pass
Scan01G0002860.1 Flavonoid UFGT medium pass
Scan01G0003070.1 Flavonoid UFGT low borderline
Scan01G0003320.1 Flavonoid UFGT high pass
Scan02G0006020.1 Flavonoid UFGT medium pass
Scan02G0007660.1 Flavonoid UFGT medium pass
Scan02G0007680.1 Flavonoid UFGT medium pass
Scan03G0010440.1 Flavonoid UFGT medium pass
Scan04G0001910.1 Flavonoid UFGT medium pass
Scan04G0001910.2 Flavonoid UFGT medium pass
Scan04G0002010.1 Flavonoid UFGT medium pass
Scan04G0003850.1 Flavonoid UFGT medium pass
Scan05G0000550.1 Flavonoid UFGT low borderline
Scan05G0009820.1 Flavonoid UFGT medium pass
Scan06G0000900.1 Flavonoid UFGT medium pass
Scan07G0000500.1 Flavonoid UFGT medium pass
Scan07G0000500.2 Flavonoid UFGT medium pass
Scan07G0009320.1 Flavonoid UFGT medium pass
Scan08G0001400.1 Flavonoid UFGT medium pass
Scan08G0008590.1 Flavonoid UFGT medium pass
Scan08G0008800.1 Flavonoid UFGT medium pass
Scan09G0006320.1 Flavonoid UFGT low borderline
Scan09G0010540.1 Flavonoid UFGT medium pass
Scan11G0003030.1 Flavonoid UFGT high pass
Scan11G0008390.1 Flavonoid UFGT medium pass
Scan12G0006330.1 Flavonoid UFGT medium pass
Scan12G0019100.1 Flavonoid UFGT high pass