PlantSME Plant secondary metabolism enzyme database

Tamarix chinensis (tamarix_chinensis)

Imported from atlas release summary for Tamarix chinensis.

836
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.03% Phenylpropanoid pathway 25.0% Alkaloid pathway 21.77% Flavonoid pathway 12.68% Rosmarinic acid pathway 7.06% Steroid pathway 6.46%
Family Distribution
BAHD 6.7% C3'H/CYP98A 5.47% POD 5.16% C4H 5.11% 4CL 4.33% IFS 3.66% NMT 3.3% 7DLGT 3.3%
Other Families 62.97%
More Families (95)
UFGT 64 3.3% UGT 64 3.3% CYP76 63 3.25% T3O 56 2.89% F3H 52 2.68% DWF4/CYP90B1 49 2.53% STR 44 2.27% SMT1/SMT2/SMT3 35 1.81% LAC 31 1.6% CAD 30 1.55% TRI/TRII 28 1.44% PYKS 27 1.39% IFR 27 1.39% H6H 26 1.34% CODM/T6ODM 26 1.34% F3'H/CYP75B 26 1.34% BR6OX2/CYP85A2 23 1.19% CSE 22 1.13% CAS 21 1.08% COMT 20 1.03% ANR 19 0.98% GS 18 0.93% HCT 17 0.88% CYP71 17 0.88% GES 16 0.83% G8O/G8H 16 0.83% RAS 16 0.83% CYP90D1 16 0.83% TPS 16 0.83% T16H 15 0.77% PMT 15 0.77% 7DLH 15 0.77% F3'5'H/CYP75A 15 0.77% CCR 13 0.67% TAT 13 0.67% SLS 12 0.62% CPD/CYP90A1 11 0.57% 8HGO 10 0.52% IO 9 0.46% SGD 9 0.46% 16OMT 9 0.46% CHS 9 0.46% PAL 9 0.46% CCoAOMT 9 0.46% NCS 7 0.36% BBE 7 0.36% CPR 7 0.36% TYDC_DDC 6 0.31% LAMT 6 0.31% COR 6 0.31% ANS/LDOX 6 0.31% CYP51G1 6 0.31% AACT 6 0.31% CNMT 5 0.26% BR6OX1/CYP85A1 5 0.26% GGPPS 5 0.26% ISY 4 0.21% FNS 4 0.21% DFR 4 0.21% F5H/CYP84A 4 0.21% HPPR 4 0.21% SMO1/SMO2 4 0.21% ROT3/CYP90C1 4 0.21% DET2 4 0.21% MVK 4 0.21% FPPS 4 0.21% MVD 4 0.21% HMGR 4 0.21% MPO 3 0.15% DWF1 3 0.15% SQS/FDFT1 3 0.15% DXS 3 0.15% PMK 3 0.15% CHI 2 0.1% SQE 2 0.1% DWF7 2 0.1% CMK/IspE 2 0.1% MCT/IspD 2 0.1% HDR/IspH 2 0.1% CYP80B1 1 0.05% TDC 1 0.05% CYP719 1 0.05% 6OMT_4OMT_SOMT 1 0.05% ADC 1 0.05% ODC 1 0.05% FLS 1 0.05% HYD1 1 0.05% FK 1 0.05% CPI1 1 0.05% DWF5 1 0.05% HDS/IspG 1 0.05% MDS/IspF 1 0.05% HMGS 1 0.05% IDI 1 0.05% DXR 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 226 19 BAHD (101) View species results
Phenylpropanoid pathway 209 12 POD (98) View species results
Alkaloid pathway 182 17 NMT (34) View species results
Flavonoid pathway 106 10 UFGT (61) View species results
Rosmarinic acid pathway 59 7 C4H (17) View species results
Steroid pathway 54 11 SMT1/SMT2/SMT3 (21) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 640 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 163 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
tamarix_chinensis_TC10G1891T1 Terpenoid UGT medium pass UGT__00110__sp_Q9ZQ95_U73C6_ARATH
tamarix_chinensis_TC11G0547T1 Terpenoid UGT medium pass UGT__00057__sp_O81498_U72E3_ARATH
tamarix_chinensis_TC11G0550T1 Terpenoid UGT medium pass UGT__00101__sp_Q9LVR1_U72E2_ARATH
tamarix_chinensis_TC12G0518T1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
tamarix_chinensis_TC12G0555T1 Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
tamarix_chinensis_TC12G0558T1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
tamarix_chinensis_TC12G0567T1 Terpenoid UGT low borderline UGT__00034__sp_F8WLS6_UGT6_CATRO
tamarix_chinensis_TC12G0910T1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
tamarix_chinensis_TC12G0911T1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
tamarix_chinensis_TC12G0912T1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
tamarix_chinensis_TC12G0913T1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
tamarix_chinensis_TC12G0933T1 Terpenoid UGT medium pass UGT__00016__sp_A0A193AUF6_GGT23_PUNGR
tamarix_chinensis_TC12G1846T1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
tamarix_chinensis_TC12G2107T1 Terpenoid UGT medium pass UGT__00021__sp_A7MAS5_75L17_MALDO