Taraxacum kok-saghyz (taraxacum_kok_saghyz)
Imported from atlas release summary for Taraxacum kok-saghyz.
1946
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1946
Candidate Genes
C4H
7.29%
C3'H/CYP98A
6.28%
BAHD
6.03%
4CL
4.2%
UGT
4.2%
CYP76
3.92%
IFS
3.88%
7DLGT
3.78%
Other Families
60.42%
More Families (96)
T3O
185
3.76%
UFGT
185
3.76%
POD
166
3.37%
DWF4/CYP90B1
137
2.78%
F3H
122
2.48%
F3'H/CYP75B
98
1.99%
CYP71
96
1.95%
BR6OX2/CYP85A2
88
1.79%
STR
84
1.71%
NMT
83
1.69%
SMT1/SMT2/SMT3
73
1.48%
H6H
71
1.44%
CODM/T6ODM
70
1.42%
CAD
61
1.24%
CAS
53
1.08%
T16H
52
1.06%
F3'5'H/CYP75A
51
1.04%
BBE
48
0.97%
TPS
48
0.97%
LAC
47
0.95%
CSE
46
0.93%
TRI/TRII
45
0.91%
PYKS
43
0.87%
GES
43
0.87%
TAT
40
0.81%
HCT
39
0.79%
GS
38
0.77%
CYP90D1
38
0.77%
IFR
37
0.75%
G8O/G8H
36
0.73%
SGD
36
0.73%
IO
34
0.69%
RAS
34
0.69%
7DLH
29
0.59%
F5H/CYP84A
29
0.59%
FNS
28
0.57%
SLS
27
0.55%
COMT
27
0.55%
CYP51G1
27
0.55%
CPD/CYP90A1
25
0.51%
BR6OX1/CYP85A1
25
0.51%
PAL
24
0.49%
ANR
24
0.49%
NCS
21
0.43%
ANS/LDOX
20
0.41%
PMT
19
0.39%
FPPS
17
0.35%
16OMT
15
0.3%
CCR
14
0.28%
ROT3/CYP90C1
14
0.28%
8HGO
13
0.26%
GGPPS
12
0.24%
CNMT
11
0.22%
CCoAOMT
11
0.22%
HPPR
11
0.22%
HMGR
11
0.22%
LAMT
10
0.2%
COR
10
0.2%
DFR
10
0.2%
AACT
10
0.2%
ISY
9
0.18%
CHS
9
0.18%
CYP80B1
8
0.16%
CYP719
7
0.14%
CHI
7
0.14%
CPR
7
0.14%
SQS/FDFT1
7
0.14%
MPO
6
0.12%
TYDC_DDC
6
0.12%
SQE
6
0.12%
MVK
6
0.12%
GPPS
6
0.12%
MCT/IspD
6
0.12%
DET2
5
0.1%
DWF1
5
0.1%
PMK
5
0.1%
ADC
4
0.08%
FLS
4
0.08%
DWF7
4
0.08%
SMO1/SMO2
4
0.08%
DXS
4
0.08%
HDS/IspG
4
0.08%
HDR/IspH
4
0.08%
XMT_MXMT_DXMT
3
0.06%
MVD
3
0.06%
CYP80F1
2
0.04%
CMK/IspE
2
0.04%
IDI
2
0.04%
DXR
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
HMGS
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 616 | 20 | BAHD (223) | View species results |
| Alkaloid pathway | 381 | 24 | 7DLGT (95) | View species results |
| Phenylpropanoid pathway | 364 | 11 | POD (152) | View species results |
| Flavonoid pathway | 265 | 12 | UFGT (169) | View species results |
| Rosmarinic acid pathway | 203 | 7 | C4H (92) | View species results |
| Steroid pathway | 117 | 13 | SMT1/SMT2/SMT3 (44) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2060 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 370 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| TkokGWHAAAA000000090000280.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| TkokGWHAAAA000002750006420.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| TkokGWHAAAA000012730026300.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000018650038910.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000019110039720.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000029610061700.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| TkokGWHAAAA000040290083090.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| TkokGWHAAAA000042740087200.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000048990099850.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000049860101710.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| TkokGWHAAAA000059510122220.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| TkokGWHAAAA000071000145630.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000087950181150.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000091300188220.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| TkokGWHAAAA000092890192060.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| TkokGWHAAAA000128480243790.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| TkokGWHAAAA000130740247190.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| TkokGWHAAAA000134650252440.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000134650252450.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000139430260300.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| TkokGWHAAAA000143080265640.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| TkokGWHAAAA000143110265700.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| TkokGWHAAAA000146440270040.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| TkokGWHAAAA000148110272360.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000152410277270.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| TkokGWHAAAA000160810290320.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| TkokGWHAAAA000170650304950.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| TkokGWHAAAA000180830319940.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| TkokGWHAAAA000190880332550.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000196040338470.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| TkokGWHAAAA000199660342700.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000211970356030.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000218440362670.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000218440362680.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000236220382970.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000244440391860.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000249060397110.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000258060407960.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000259140409270.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000277680430940.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| TkokGWHAAAA000286440440830.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| TkokGWHAAAA000287580442330.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| TkokGWHAAAA000287590442400.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000296020450990.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| TkokGWHAAAA000304870457890.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |