PlantSME Plant secondary metabolism enzyme database

Tetrabaena socialis (tetrabaena_socialis)

Imported from atlas release summary for Tetrabaena socialis.

85
Candidate Genes
81
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 35.29% Alkaloid pathway 22.35% Phenylpropanoid pathway 20.0% Steroid pathway 14.12% Rosmarinic acid pathway 7.06% Flavonoid pathway 1.18%
Family Distribution
NMT 7.14% 4CL 5.53% C4H 5.3% BAHD 5.3% C3'H/CYP98A 4.61% POD 4.15% IFR 3.46% IFS 3.23%
Other Families 61.29%
More Families (73)
CYP76 13 3.0% CNMT 12 2.76% STR 11 2.53% SMT1/SMT2/SMT3 11 2.53% BR6OX2/CYP85A2 11 2.53% CYP71 11 2.53% DWF4/CYP90B1 9 2.07% T3O 8 1.84% GS 8 1.84% TRI/TRII 8 1.84% CAS 8 1.84% FNS 7 1.61% CSE 7 1.61% IO 6 1.38% SQS/FDFT1 6 1.38% 7DLH 5 1.15% PYKS 5 1.15% SLS 5 1.15% CAD 5 1.15% CPR 5 1.15% FPPS 5 1.15% CYP719 4 0.92% F3'H/CYP75B 4 0.92% CYP90D1 4 0.92% CPD/CYP90A1 4 0.92% COR 3 0.69% 7DLGT 3 0.69% MPO 3 0.69% PMT 3 0.69% UFGT 3 0.69% SQE 3 0.69% DET2 3 0.69% AACT 3 0.69% ODC 2 0.46% BBE 2 0.46% 8HGO 2 0.46% CYP80B1 2 0.46% 6OMT_4OMT_SOMT 2 0.46% ANR 2 0.46% F3'5'H/CYP75A 2 0.46% DFR 2 0.46% COMT 2 0.46% TAT 2 0.46% CYP51G1 2 0.46% BR6OX1/CYP85A1 2 0.46% HMGS 2 0.46% HMGR 2 0.46% MVD 2 0.46% MVK 2 0.46% MCT/IspD 2 0.46% DXS 2 0.46% GGPPS 2 0.46% CMK/IspE 2 0.46% TDC 1 0.23% T16H 1 0.23% G8O/G8H 1 0.23% SGD 1 0.23% GES 1 0.23% CCR 1 0.23% CCoAOMT 1 0.23% HPPR 1 0.23% RAS 1 0.23% CPI1 1 0.23% DWF7 1 0.23% ROT3/CYP90C1 1 0.23% HYD1 1 0.23% DXR 1 0.23% HDR/IspH 1 0.23% HDS/IspG 1 0.23% IDI 1 0.23% MDS/IspF 1 0.23% UGT 1 0.23% TPS 1 0.23%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 30 13 BAHD (8) View species results
Alkaloid pathway 19 9 TRI/TRII (5) View species results
Phenylpropanoid pathway 17 5 POD (12) View species results
Steroid pathway 12 6 CAS (5) View species results
Rosmarinic acid pathway 6 3 CPR (3) View species results
Flavonoid pathway 1 1 ANR (1) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 22 152 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 2 24 BAHD, RAS
Identification Result List
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Gene Pathway Family Confidence Status
PNH01517.1_tsocial Phenylpropanoid CAD low borderline
PNH01520.1_tsocial Phenylpropanoid CAD medium borderline
PNH01781.1_tsocial Phenylpropanoid CAD medium pass
PNH06562.1_tsocial Phenylpropanoid CAD medium borderline
PNH06839.1_tsocial Phenylpropanoid CAD medium pass