PlantSME Plant secondary metabolism enzyme database

Tetrabaena socialis (tetrabaena_socialis)

Imported from atlas release summary for Tetrabaena socialis.

85
Candidate Genes
81
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 35.29% Alkaloid pathway 22.35% Phenylpropanoid pathway 20.0% Steroid pathway 14.12% Rosmarinic acid pathway 7.06% Flavonoid pathway 1.18%
Family Distribution
NMT 7.14% 4CL 5.53% C4H 5.3% BAHD 5.3% C3'H/CYP98A 4.61% POD 4.15% IFR 3.46% IFS 3.23%
Other Families 61.29%
More Families (73)
CYP76 13 3.0% CNMT 12 2.76% STR 11 2.53% SMT1/SMT2/SMT3 11 2.53% BR6OX2/CYP85A2 11 2.53% CYP71 11 2.53% DWF4/CYP90B1 9 2.07% T3O 8 1.84% GS 8 1.84% TRI/TRII 8 1.84% CAS 8 1.84% FNS 7 1.61% CSE 7 1.61% IO 6 1.38% SQS/FDFT1 6 1.38% 7DLH 5 1.15% PYKS 5 1.15% SLS 5 1.15% CAD 5 1.15% CPR 5 1.15% FPPS 5 1.15% CYP719 4 0.92% F3'H/CYP75B 4 0.92% CYP90D1 4 0.92% CPD/CYP90A1 4 0.92% COR 3 0.69% 7DLGT 3 0.69% MPO 3 0.69% PMT 3 0.69% UFGT 3 0.69% SQE 3 0.69% DET2 3 0.69% AACT 3 0.69% ODC 2 0.46% BBE 2 0.46% 8HGO 2 0.46% CYP80B1 2 0.46% 6OMT_4OMT_SOMT 2 0.46% ANR 2 0.46% F3'5'H/CYP75A 2 0.46% DFR 2 0.46% COMT 2 0.46% TAT 2 0.46% CYP51G1 2 0.46% BR6OX1/CYP85A1 2 0.46% HMGS 2 0.46% HMGR 2 0.46% MVD 2 0.46% MVK 2 0.46% MCT/IspD 2 0.46% DXS 2 0.46% GGPPS 2 0.46% CMK/IspE 2 0.46% TDC 1 0.23% T16H 1 0.23% G8O/G8H 1 0.23% SGD 1 0.23% GES 1 0.23% CCR 1 0.23% CCoAOMT 1 0.23% HPPR 1 0.23% RAS 1 0.23% CPI1 1 0.23% DWF7 1 0.23% ROT3/CYP90C1 1 0.23% HYD1 1 0.23% DXR 1 0.23% HDR/IspH 1 0.23% HDS/IspG 1 0.23% IDI 1 0.23% MDS/IspF 1 0.23% UGT 1 0.23% TPS 1 0.23%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 30 13 BAHD (8) View species results
Alkaloid pathway 19 9 TRI/TRII (5) View species results
Phenylpropanoid pathway 17 5 POD (12) View species results
Steroid pathway 12 6 CAS (5) View species results
Rosmarinic acid pathway 6 3 CPR (3) View species results
Flavonoid pathway 1 1 ANR (1) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 22 152 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 2 24 BAHD, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
PNH02196.1_tsocial Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
PNH05887.1_tsocial Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
PNH07927.1_tsocial Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
PNH09004.1_tsocial Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
PNH09405.1_tsocial Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
PNH10311.1_tsocial Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
PNH12282.1_tsocial Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
PNH12845.1_tsocial Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH