Tetrabaena socialis (tetrabaena_socialis)
Imported from atlas release summary for Tetrabaena socialis.
85
Candidate Genes
81
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
85
Candidate Genes
NMT
7.14%
4CL
5.53%
C4H
5.3%
BAHD
5.3%
C3'H/CYP98A
4.61%
POD
4.15%
IFR
3.46%
IFS
3.23%
Other Families
61.29%
More Families (73)
CYP76
13
3.0%
CNMT
12
2.76%
STR
11
2.53%
SMT1/SMT2/SMT3
11
2.53%
BR6OX2/CYP85A2
11
2.53%
CYP71
11
2.53%
DWF4/CYP90B1
9
2.07%
T3O
8
1.84%
GS
8
1.84%
TRI/TRII
8
1.84%
CAS
8
1.84%
FNS
7
1.61%
CSE
7
1.61%
IO
6
1.38%
SQS/FDFT1
6
1.38%
7DLH
5
1.15%
PYKS
5
1.15%
SLS
5
1.15%
CAD
5
1.15%
CPR
5
1.15%
FPPS
5
1.15%
CYP719
4
0.92%
F3'H/CYP75B
4
0.92%
CYP90D1
4
0.92%
CPD/CYP90A1
4
0.92%
COR
3
0.69%
7DLGT
3
0.69%
MPO
3
0.69%
PMT
3
0.69%
UFGT
3
0.69%
SQE
3
0.69%
DET2
3
0.69%
AACT
3
0.69%
ODC
2
0.46%
BBE
2
0.46%
8HGO
2
0.46%
CYP80B1
2
0.46%
6OMT_4OMT_SOMT
2
0.46%
ANR
2
0.46%
F3'5'H/CYP75A
2
0.46%
DFR
2
0.46%
COMT
2
0.46%
TAT
2
0.46%
CYP51G1
2
0.46%
BR6OX1/CYP85A1
2
0.46%
HMGS
2
0.46%
HMGR
2
0.46%
MVD
2
0.46%
MVK
2
0.46%
MCT/IspD
2
0.46%
DXS
2
0.46%
GGPPS
2
0.46%
CMK/IspE
2
0.46%
TDC
1
0.23%
T16H
1
0.23%
G8O/G8H
1
0.23%
SGD
1
0.23%
GES
1
0.23%
CCR
1
0.23%
CCoAOMT
1
0.23%
HPPR
1
0.23%
RAS
1
0.23%
CPI1
1
0.23%
DWF7
1
0.23%
ROT3/CYP90C1
1
0.23%
HYD1
1
0.23%
DXR
1
0.23%
HDR/IspH
1
0.23%
HDS/IspG
1
0.23%
IDI
1
0.23%
MDS/IspF
1
0.23%
UGT
1
0.23%
TPS
1
0.23%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 30 | 13 | BAHD (8) | View species results |
| Alkaloid pathway | 19 | 9 | TRI/TRII (5) | View species results |
| Phenylpropanoid pathway | 17 | 5 | POD (12) | View species results |
| Steroid pathway | 12 | 6 | CAS (5) | View species results |
| Rosmarinic acid pathway | 6 | 3 | CPR (3) | View species results |
| Flavonoid pathway | 1 | 1 | ANR (1) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 22 | 152 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 2 | 24 | BAHD, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| PNH12011.1_tsocial | Terpenoid | CYP76 | low | borderline |
| PNH12250.1_tsocial | Terpenoid | CYP76 | low | borderline |
| PNH02032.1_tsocial | Terpenoid | DXR | medium | pass |
| PNH02990.1_tsocial | Terpenoid | DXS | low | borderline |
| PNH09811.1_tsocial | Terpenoid | DXS | medium | pass |
| PNG99519.1_tsocial | Terpenoid | FPPS | low | borderline |
| PNH01070.1_tsocial | Terpenoid | FPPS | low | borderline |
| PNH02131.1_tsocial | Terpenoid | FPPS | low | borderline |
| PNH05296.1_tsocial | Terpenoid | FPPS | low | borderline |
| PNH09203.1_tsocial | Terpenoid | FPPS | medium | pass |
| PNH05603.1_tsocial | Terpenoid | GGPPS | medium | borderline |
| PNH08036.1_tsocial | Terpenoid | GGPPS | medium | borderline |
| PNH07525.1_tsocial | Terpenoid | HDR/IspH | medium | pass |
| PNH09629.1_tsocial | Terpenoid | HDS/IspG | low | borderline |
| PNG98989.1_tsocial | Terpenoid | HMGR | low | borderline |
| PNH11730.1_tsocial | Terpenoid | HMGR | low | borderline |
| PNG89391.1_tsocial | Terpenoid | HMGS | high | pass |
| PNH08078.1_tsocial | Terpenoid | HMGS | low | borderline |
| PNH09793.1_tsocial | Terpenoid | IDI | medium | pass |
| PNH01402.1_tsocial | Terpenoid | MCT/IspD | low | borderline |
| PNH03690.1_tsocial | Terpenoid | MCT/IspD | high | pass |
| PNH09948.1_tsocial | Terpenoid | MDS/IspF | high | pass |
| PNH00240.1_tsocial | Terpenoid | MVD | low | borderline |
| PNH05516.1_tsocial | Terpenoid | MVD | low | borderline |
| PNH00388.1_tsocial | Terpenoid | MVK | low | borderline |
| PNH02052.1_tsocial | Terpenoid | MVK | low | borderline |
| PNH11171.1_tsocial | Terpenoid | TPS | low | borderline |
| PNH10658.1_tsocial | Terpenoid | UGT | low | borderline |