PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
THsancontig_1140020410 Alkaloid G8O/G8H low borderline
THsancontig_1140020440 Alkaloid G8O/G8H medium borderline
THsancontig_1150026390 Alkaloid G8O/G8H medium borderline
THsancontig_1220037950 Alkaloid G8O/G8H medium borderline
THsancontig_1240045850 Alkaloid G8O/G8H low borderline
THsancontig_130051390 Alkaloid G8O/G8H low borderline
THsancontig_1450072000 Alkaloid G8O/G8H medium pass
THsancontig_1680093060 Alkaloid G8O/G8H low borderline
THsancontig_1680093880 Alkaloid G8O/G8H medium borderline
THsancontig_1680096280 Alkaloid G8O/G8H medium borderline
THsancontig_1790108260 Alkaloid G8O/G8H medium borderline
THsancontig_1920126590 Alkaloid G8O/G8H medium pass
THsancontig_2100154720 Alkaloid G8O/G8H medium borderline
THsancontig_2150170430 Alkaloid G8O/G8H medium pass
THsancontig_2460191440 Alkaloid G8O/G8H medium borderline
THsancontig_2830244850 Alkaloid G8O/G8H low borderline
THsancontig_2830244990 Alkaloid G8O/G8H medium borderline
THsancontig_2830245040 Alkaloid G8O/G8H medium borderline
THsancontig_2880257700 Alkaloid G8O/G8H low borderline
THsancontig_2950267760 Alkaloid G8O/G8H medium borderline
THsancontig_3030282740 Alkaloid G8O/G8H medium borderline
THsancontig_3190306770 Alkaloid G8O/G8H medium borderline
THsancontig_3210308650 Alkaloid G8O/G8H medium borderline
THsancontig_3220310400 Alkaloid G8O/G8H low borderline
THsancontig_3260319660 Alkaloid G8O/G8H medium borderline
THsancontig_3300329810 Alkaloid G8O/G8H low borderline
THsancontig_3300329840 Alkaloid G8O/G8H low borderline
THsancontig_3300329850 Alkaloid G8O/G8H medium borderline
THsancontig_3410345300 Alkaloid G8O/G8H medium borderline
THsancontig_3570373440 Alkaloid G8O/G8H low borderline
THsancontig_3610380300 Alkaloid G8O/G8H medium borderline
THsancontig_3670381710 Alkaloid G8O/G8H medium borderline
THsancontig_3730387730 Alkaloid G8O/G8H medium borderline
THsancontig_4030431090 Alkaloid G8O/G8H medium borderline
THsancontig_4060438780 Alkaloid G8O/G8H medium borderline
THsancontig_600490330 Alkaloid G8O/G8H medium borderline