PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
THsancontig_1080012240 Alkaloid IO medium borderline
THsancontig_1140020430 Alkaloid IO medium borderline
THsancontig_1140020880 Alkaloid IO medium borderline
THsancontig_1170032440 Alkaloid IO medium borderline
THsancontig_1170032580 Alkaloid IO medium borderline
THsancontig_1260046670 Alkaloid IO medium borderline
THsancontig_1270047330 Alkaloid IO medium borderline
THsancontig_1270047940 Alkaloid IO low borderline
THsancontig_1270047970 Alkaloid IO low borderline
THsancontig_1270047990 Alkaloid IO low borderline
THsancontig_1280049350 Alkaloid IO medium borderline
THsancontig_1370063650 Alkaloid IO medium borderline
THsancontig_140064980 Alkaloid IO medium borderline
THsancontig_1470073960 Alkaloid IO medium borderline
THsancontig_1680093080 Alkaloid IO medium borderline
THsancontig_1680093920 Alkaloid IO medium borderline
THsancontig_1680093930 Alkaloid IO medium borderline
THsancontig_1680094470 Alkaloid IO medium borderline
THsancontig_1680096260 Alkaloid IO medium borderline
THsancontig_1680096270 Alkaloid IO medium borderline
THsancontig_170100640 Alkaloid IO medium borderline
THsancontig_1920124110 Alkaloid IO medium borderline
THsancontig_2110156870 Alkaloid IO medium borderline
THsancontig_2150170490 Alkaloid IO medium borderline
THsancontig_2460191620 Alkaloid IO medium borderline
THsancontig_2750226740 Alkaloid IO medium borderline
THsancontig_2750227620 Alkaloid IO medium borderline
THsancontig_2880259310 Alkaloid IO medium borderline
THsancontig_2990273300 Alkaloid IO medium borderline
THsancontig_3170300270 Alkaloid IO medium borderline
THsancontig_3220310360 Alkaloid IO medium borderline
THsancontig_3260319650 Alkaloid IO medium borderline
THsancontig_3260319790 Alkaloid IO medium borderline
THsancontig_3450358220 Alkaloid IO low borderline
THsancontig_3500368090 Alkaloid IO medium borderline
THsancontig_3690382680 Alkaloid IO medium borderline
THsancontig_3690384400 Alkaloid IO medium borderline
THsancontig_3730391370 Alkaloid IO medium borderline
THsancontig_3830406370 Alkaloid IO medium borderline
THsancontig_3930415220 Alkaloid IO medium borderline
THsancontig_3940415590 Alkaloid IO medium borderline
THsancontig_3990420510 Alkaloid IO medium borderline
THsancontig_4030431410 Alkaloid IO low borderline
THsancontig_4030431430 Alkaloid IO low borderline
THsancontig_4030431450 Alkaloid IO low borderline
THsancontig_4070441510 Alkaloid IO medium borderline
THsancontig_540470180 Alkaloid IO low borderline
THsancontig_570478400 Alkaloid IO medium borderline
THsancontig_600491910 Alkaloid IO medium borderline
THsancontig_760508000 Alkaloid IO medium borderline