PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
THsancontig_1030004290 Alkaloid GS low borderline
THsancontig_1140020130 Alkaloid GS low borderline
THsancontig_1290050370 Alkaloid GS low borderline
THsancontig_1290051110 Alkaloid GS low borderline
THsancontig_1290051150 Alkaloid GS low borderline
THsancontig_1320055530 Alkaloid GS low borderline
THsancontig_1370060550 Alkaloid GS low borderline
THsancontig_1410069610 Alkaloid GS low borderline
THsancontig_1490075560 Alkaloid GS low borderline
THsancontig_1580081980 Alkaloid GS low borderline
THsancontig_1680093490 Alkaloid GS low borderline
THsancontig_1750103560 Alkaloid GS low borderline
THsancontig_1770105850 Alkaloid GS low borderline
THsancontig_1770105860 Alkaloid GS low borderline
THsancontig_1800112960 Alkaloid GS low borderline
THsancontig_1920123890 Alkaloid GS low borderline
THsancontig_2330184880 Alkaloid GS medium pass
THsancontig_2650217390 Alkaloid GS low borderline
THsancontig_270222620 Alkaloid GS low borderline
THsancontig_2710223430 Alkaloid GS low borderline
THsancontig_2730224570 Alkaloid GS medium pass
THsancontig_2790233760 Alkaloid GS low borderline
THsancontig_2800237630 Alkaloid GS high pass
THsancontig_2800237850 Alkaloid GS high pass
THsancontig_2800237880 Alkaloid GS high pass
THsancontig_2800237900 Alkaloid GS medium pass
THsancontig_3080289400 Alkaloid GS low borderline
THsancontig_3090290510 Alkaloid GS high pass
THsancontig_310292660 Alkaloid GS low borderline
THsancontig_3140298570 Alkaloid GS low borderline
THsancontig_3170301840 Alkaloid GS low borderline
THsancontig_3170301850 Alkaloid GS low borderline
THsancontig_3170302470 Alkaloid GS low borderline
THsancontig_3230315460 Alkaloid GS low borderline
THsancontig_3230315470 Alkaloid GS low borderline
THsancontig_3270321260 Alkaloid GS low borderline
THsancontig_3270322740 Alkaloid GS medium pass
THsancontig_330328640 Alkaloid GS low borderline
THsancontig_3330335570 Alkaloid GS low borderline
THsancontig_3350336730 Alkaloid GS low borderline
THsancontig_3430349880 Alkaloid GS low borderline
THsancontig_3450357590 Alkaloid GS medium pass
THsancontig_3450358260 Alkaloid GS low borderline
THsancontig_3450361460 Alkaloid GS low borderline
THsancontig_3550370980 Alkaloid GS low borderline
THsancontig_3560371120 Alkaloid GS low borderline
THsancontig_3710386680 Alkaloid GS low borderline
THsancontig_3810402430 Alkaloid GS medium pass
THsancontig_3840408030 Alkaloid GS low borderline
THsancontig_3850409720 Alkaloid GS low borderline