PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
THsancontig_1000001190 Alkaloid T3O high pass
THsancontig_1000001200 Alkaloid T3O medium pass
THsancontig_1130017990 Alkaloid T3O medium borderline
THsancontig_1140019760 Alkaloid T3O medium borderline
THsancontig_1140019790 Alkaloid T3O medium borderline
THsancontig_1140019900 Alkaloid T3O medium borderline
THsancontig_1140019910 Alkaloid T3O medium borderline
THsancontig_1140020070 Alkaloid T3O medium borderline
THsancontig_1160028060 Alkaloid T3O low borderline
THsancontig_1360059970 Alkaloid T3O low borderline
THsancontig_1480074660 Alkaloid T3O medium pass
THsancontig_150076570 Alkaloid T3O medium borderline
THsancontig_1590082460 Alkaloid T3O low borderline
THsancontig_1640086800 Alkaloid T3O medium borderline
THsancontig_1680093100 Alkaloid T3O medium borderline
THsancontig_1680093120 Alkaloid T3O medium borderline
THsancontig_1680093260 Alkaloid T3O medium borderline
THsancontig_1680093290 Alkaloid T3O medium borderline
THsancontig_1680093440 Alkaloid T3O medium borderline
THsancontig_1850119890 Alkaloid T3O low borderline
THsancontig_1890123280 Alkaloid T3O medium pass
THsancontig_1920124100 Alkaloid T3O medium borderline
THsancontig_1920126610 Alkaloid T3O medium borderline
THsancontig_2050148250 Alkaloid T3O medium pass
THsancontig_2100154600 Alkaloid T3O medium borderline
THsancontig_2140164020 Alkaloid T3O medium borderline
THsancontig_2150170200 Alkaloid T3O medium borderline
THsancontig_2150170460 Alkaloid T3O medium borderline
THsancontig_2150170510 Alkaloid T3O medium borderline
THsancontig_2150170540 Alkaloid T3O medium borderline
THsancontig_2420188920 Alkaloid T3O medium pass
THsancontig_2480194750 Alkaloid T3O medium borderline
THsancontig_2590207660 Alkaloid T3O medium borderline
THsancontig_2760229120 Alkaloid T3O medium pass
THsancontig_2760229140 Alkaloid T3O medium pass
THsancontig_2760229150 Alkaloid T3O medium pass
THsancontig_2820241300 Alkaloid T3O medium pass
THsancontig_2950268460 Alkaloid T3O low borderline
THsancontig_2950268470 Alkaloid T3O low borderline
THsancontig_3010279260 Alkaloid T3O medium borderline
THsancontig_3010279310 Alkaloid T3O medium borderline
THsancontig_3170302060 Alkaloid T3O medium borderline
THsancontig_3170302180 Alkaloid T3O medium borderline
THsancontig_3230313650 Alkaloid T3O medium borderline
THsancontig_3310333540 Alkaloid T3O medium borderline
THsancontig_3420348880 Alkaloid T3O medium borderline
THsancontig_3460365510 Alkaloid T3O medium borderline
THsancontig_3480366610 Alkaloid T3O low borderline
THsancontig_3530369130 Alkaloid T3O medium pass
THsancontig_3600379560 Alkaloid T3O medium borderline