PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1677
Candidate Protein Records
1313
Pathway-Level Records
3223
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
THsancontig_610495770 Flavonoid IFS low borderline
THsancontig_760507240 Flavonoid IFS medium borderline
THsancontig_760507280 Flavonoid IFS medium borderline
THsancontig_760508310 Flavonoid IFS medium borderline
THsancontig_860519070 Flavonoid IFS medium borderline
THsancontig_860519810 Flavonoid IFS medium borderline
THsancontig_950523300 Flavonoid IFS low borderline
THsancontig_1260046680 Flavonoid PAL medium pass
THsancontig_1260046690 Flavonoid PAL high pass
THsancontig_1350059010 Flavonoid PAL high pass
THsancontig_140064860 Flavonoid PAL high pass
THsancontig_140064890 Flavonoid PAL high pass
THsancontig_1530079620 Flavonoid PAL high pass
THsancontig_1530079640 Flavonoid PAL high pass
THsancontig_1530079670 Flavonoid PAL medium pass
THsancontig_1530079680 Flavonoid PAL medium pass
THsancontig_1530079700 Flavonoid PAL high pass
THsancontig_1710102100 Flavonoid PAL high pass
THsancontig_1710102120 Flavonoid PAL high pass
THsancontig_2300183510 Flavonoid PAL high pass
THsancontig_2300183520 Flavonoid PAL high pass
THsancontig_2300183560 Flavonoid PAL high pass
THsancontig_2300183590 Flavonoid PAL high pass
THsancontig_2300183620 Flavonoid PAL high pass
THsancontig_2450189810 Flavonoid PAL medium pass
THsancontig_2510197860 Flavonoid PAL high pass
THsancontig_2510197950 Flavonoid PAL medium pass
THsancontig_2510197960 Flavonoid PAL medium pass
THsancontig_2560205140 Flavonoid PAL high pass
THsancontig_2620212350 Flavonoid PAL high pass
THsancontig_2620212370 Flavonoid PAL high pass
THsancontig_2670219700 Flavonoid PAL high pass
THsancontig_2670219730 Flavonoid PAL high pass
THsancontig_270222410 Flavonoid PAL high pass
THsancontig_2750227980 Flavonoid PAL medium pass
THsancontig_2750227990 Flavonoid PAL medium pass
THsancontig_2800237960 Flavonoid PAL high pass
THsancontig_280235320 Flavonoid PAL high pass
THsancontig_280235390 Flavonoid PAL high pass
THsancontig_2830246780 Flavonoid PAL high pass
THsancontig_2830246830 Flavonoid PAL high pass
THsancontig_2830246850 Flavonoid PAL high pass
THsancontig_2960269150 Flavonoid PAL high pass
THsancontig_2960269160 Flavonoid PAL medium pass
THsancontig_2960269190 Flavonoid PAL medium pass
THsancontig_2960269200 Flavonoid PAL high pass
THsancontig_2960269260 Flavonoid PAL high pass
THsancontig_2960269290 Flavonoid PAL high pass
THsancontig_2960269460 Flavonoid PAL high pass
THsancontig_2960269500 Flavonoid PAL medium pass