PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
THsancontig_90520720 Rosmarinic Acid 4CL medium pass
THsancontig_960524420 Rosmarinic Acid 4CL low borderline
THsancontig_1080012240 Rosmarinic Acid C4H medium pass
THsancontig_1130017990 Rosmarinic Acid C4H low borderline
THsancontig_1140019760 Rosmarinic Acid C4H medium pass
THsancontig_1140019790 Rosmarinic Acid C4H medium pass
THsancontig_1140019900 Rosmarinic Acid C4H low borderline
THsancontig_1140019910 Rosmarinic Acid C4H low borderline
THsancontig_1140020070 Rosmarinic Acid C4H medium pass
THsancontig_1140020430 Rosmarinic Acid C4H medium pass
THsancontig_1140020440 Rosmarinic Acid C4H medium pass
THsancontig_1140020880 Rosmarinic Acid C4H low borderline
THsancontig_1170032000 Rosmarinic Acid C4H low borderline
THsancontig_1170032330 Rosmarinic Acid C4H low borderline
THsancontig_1170032440 Rosmarinic Acid C4H medium pass
THsancontig_1170032580 Rosmarinic Acid C4H medium pass
THsancontig_1220037950 Rosmarinic Acid C4H low borderline
THsancontig_1240045850 Rosmarinic Acid C4H low borderline
THsancontig_1270047330 Rosmarinic Acid C4H medium pass
THsancontig_1280049350 Rosmarinic Acid C4H medium pass
THsancontig_130051370 Rosmarinic Acid C4H low borderline
THsancontig_130051390 Rosmarinic Acid C4H low borderline
THsancontig_130051400 Rosmarinic Acid C4H low borderline
THsancontig_130051410 Rosmarinic Acid C4H low borderline
THsancontig_1370063650 Rosmarinic Acid C4H medium pass
THsancontig_1370063670 Rosmarinic Acid C4H medium pass
THsancontig_140064980 Rosmarinic Acid C4H medium pass
THsancontig_1470073960 Rosmarinic Acid C4H medium pass
THsancontig_1480074660 Rosmarinic Acid C4H low borderline
THsancontig_150076570 Rosmarinic Acid C4H low borderline
THsancontig_1640086800 Rosmarinic Acid C4H medium pass
THsancontig_1680093060 Rosmarinic Acid C4H low borderline
THsancontig_1680093080 Rosmarinic Acid C4H low borderline
THsancontig_1680093100 Rosmarinic Acid C4H medium pass
THsancontig_1680093120 Rosmarinic Acid C4H medium pass
THsancontig_1680093260 Rosmarinic Acid C4H low borderline
THsancontig_1680093290 Rosmarinic Acid C4H low borderline
THsancontig_1680093440 Rosmarinic Acid C4H medium pass
THsancontig_1680093880 Rosmarinic Acid C4H medium pass
THsancontig_1680093920 Rosmarinic Acid C4H medium pass
THsancontig_1680093930 Rosmarinic Acid C4H medium pass
THsancontig_1680094470 Rosmarinic Acid C4H low borderline
THsancontig_1680096260 Rosmarinic Acid C4H medium pass
THsancontig_1680096270 Rosmarinic Acid C4H low borderline
THsancontig_170100640 Rosmarinic Acid C4H medium pass
THsancontig_1820117480 Rosmarinic Acid C4H low borderline
THsancontig_1820117510 Rosmarinic Acid C4H low borderline
THsancontig_1850119040 Rosmarinic Acid C4H low borderline
THsancontig_1890122450 Rosmarinic Acid C4H low borderline
THsancontig_1890123280 Rosmarinic Acid C4H low borderline