PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1677
Candidate Protein Records
1313
Pathway-Level Records
3223
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
THsancontig_3130295470 Rosmarinic Acid PAL high pass
THsancontig_3820403350 Rosmarinic Acid PAL high pass
THsancontig_3850409500 Rosmarinic Acid PAL high pass
THsancontig_4060436990 Rosmarinic Acid PAL high pass
THsancontig_580480080 Rosmarinic Acid PAL high pass
THsancontig_600493980 Rosmarinic Acid PAL high pass
THsancontig_600494020 Rosmarinic Acid PAL high pass
THsancontig_600494080 Rosmarinic Acid PAL high pass
THsancontig_1110015210 Rosmarinic Acid RAS medium pass
THsancontig_2120157770 Rosmarinic Acid RAS low borderline
THsancontig_2300183330 Rosmarinic Acid RAS low borderline
THsancontig_2760230320 Rosmarinic Acid RAS low borderline
THsancontig_2830247110 Rosmarinic Acid RAS low borderline
THsancontig_2880256550 Rosmarinic Acid RAS medium pass
THsancontig_2880259410 Rosmarinic Acid RAS medium pass
THsancontig_3000278600 Rosmarinic Acid RAS medium pass
THsancontig_3230314110 Rosmarinic Acid RAS low borderline
THsancontig_3290327730 Rosmarinic Acid RAS medium pass
THsancontig_3400343930 Rosmarinic Acid RAS low borderline
THsancontig_3440356550 Rosmarinic Acid RAS medium pass
THsancontig_3440356790 Rosmarinic Acid RAS low borderline
THsancontig_3450360520 Rosmarinic Acid RAS medium pass
THsancontig_430449400 Rosmarinic Acid RAS medium pass
THsancontig_470456950 Rosmarinic Acid RAS medium pass
THsancontig_590483900 Rosmarinic Acid RAS medium pass
THsancontig_600489240 Rosmarinic Acid RAS low borderline
THsancontig_600492000 Rosmarinic Acid RAS medium pass
THsancontig_1140020490 Rosmarinic Acid TAT medium pass
THsancontig_1680094000 Rosmarinic Acid TAT medium pass
THsancontig_2060149060 Rosmarinic Acid TAT medium pass
THsancontig_2420189380 Rosmarinic Acid TAT medium pass
THsancontig_3530369790 Rosmarinic Acid TAT medium pass
THsancontig_3920414840 Rosmarinic Acid TAT medium pass
THsancontig_490463880 Rosmarinic Acid TAT low borderline
THsancontig_1130017990 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_180110740 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_2830244990 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_3390340180 Steroid BR6OX1/CYP85A1 medium borderline
THsancontig_3420348880 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_3480366610 Steroid BR6OX1/CYP85A1 medium borderline
THsancontig_860517230 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_1140020430 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1140020440 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1140020880 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1170032000 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1280049350 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1480074660 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_150076570 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1680093880 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1680093920 Steroid BR6OX2/CYP85A2 low borderline