PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
THsancontig_3570372780 Flavonoid F3H medium borderline
THsancontig_3580375580 Flavonoid F3H low borderline
THsancontig_360377960 Flavonoid F3H medium borderline
THsancontig_3690384940 Flavonoid F3H low borderline
THsancontig_3840407790 Flavonoid F3H medium borderline
THsancontig_3840407830 Flavonoid F3H medium borderline
THsancontig_3940416320 Flavonoid F3H medium borderline
THsancontig_4000425670 Flavonoid F3H medium borderline
THsancontig_400424450 Flavonoid F3H low borderline
THsancontig_4050434580 Flavonoid F3H medium borderline
THsancontig_4070442860 Flavonoid F3H medium borderline
THsancontig_4070443240 Flavonoid F3H medium borderline
THsancontig_430446660 Flavonoid F3H medium borderline
THsancontig_480458010 Flavonoid F3H medium borderline
THsancontig_570477460 Flavonoid F3H low borderline
THsancontig_580481200 Flavonoid F3H medium borderline
THsancontig_590487720 Flavonoid F3H low borderline
THsancontig_600490590 Flavonoid F3H medium pass
THsancontig_600491350 Flavonoid F3H medium borderline
THsancontig_770508790 Flavonoid F3H medium borderline
THsancontig_770508810 Flavonoid F3H medium borderline
THsancontig_860517480 Flavonoid F3H medium borderline
THsancontig_2560204990 Flavonoid FLS medium borderline
THsancontig_3090291280 Flavonoid FLS low borderline
THsancontig_4070443230 Flavonoid FLS medium borderline
THsancontig_480461430 Flavonoid FLS medium borderline
THsancontig_580479920 Flavonoid FLS medium borderline
THsancontig_600490570 Flavonoid FLS low borderline
THsancontig_1140020450 Flavonoid FNS medium borderline
THsancontig_1240045850 Flavonoid FNS medium borderline
THsancontig_130051390 Flavonoid FNS low borderline
THsancontig_1320056190 Flavonoid FNS medium borderline
THsancontig_1590082460 Flavonoid FNS medium borderline
THsancontig_1680096270 Flavonoid FNS medium borderline
THsancontig_1790108260 Flavonoid FNS medium borderline
THsancontig_1800112790 Flavonoid FNS medium borderline
THsancontig_1850119890 Flavonoid FNS medium borderline
THsancontig_1920126590 Flavonoid FNS medium borderline
THsancontig_2880257690 Flavonoid FNS medium borderline
THsancontig_2880257700 Flavonoid FNS medium borderline
THsancontig_3030282740 Flavonoid FNS medium borderline
THsancontig_3070288950 Flavonoid FNS medium borderline
THsancontig_3150299590 Flavonoid FNS low borderline
THsancontig_3300329810 Flavonoid FNS low borderline
THsancontig_360377120 Flavonoid FNS medium borderline
THsancontig_3730389320 Flavonoid FNS low borderline
THsancontig_3890413180 Flavonoid FNS medium borderline
THsancontig_4060438590 Flavonoid FNS low borderline
THsancontig_4070440450 Flavonoid FNS medium borderline
THsancontig_1020002060 Flavonoid IFR low borderline