PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1677
Candidate Protein Records
1313
Pathway-Level Records
3223
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
THsancontig_480461150 Phenylpropanoid CSE medium pass
THsancontig_570477100 Phenylpropanoid CSE low borderline
THsancontig_1130017990 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_1680093050 Phenylpropanoid F5H/CYP84A medium pass
THsancontig_1680096270 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_2040141190 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_2100154790 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_2560205110 Phenylpropanoid F5H/CYP84A low borderline
THsancontig_3300329960 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_3420348880 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_3690382910 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_3930415220 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_3940415590 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_3990420530 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_600490330 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_760508310 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_90520710 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_980526130 Phenylpropanoid F5H/CYP84A medium borderline
THsancontig_1110015210 Phenylpropanoid HCT medium pass
THsancontig_1650087790 Phenylpropanoid HCT low borderline
THsancontig_2830247110 Phenylpropanoid HCT medium pass
THsancontig_2880259410 Phenylpropanoid HCT medium pass
THsancontig_3000278600 Phenylpropanoid HCT medium pass
THsancontig_3290327730 Phenylpropanoid HCT medium pass
THsancontig_3400343930 Phenylpropanoid HCT medium pass
THsancontig_3440356550 Phenylpropanoid HCT medium pass
THsancontig_3440356790 Phenylpropanoid HCT low borderline
THsancontig_3450360440 Phenylpropanoid HCT medium pass
THsancontig_3450360520 Phenylpropanoid HCT medium pass
THsancontig_430449400 Phenylpropanoid HCT medium pass
THsancontig_470456950 Phenylpropanoid HCT medium pass
THsancontig_490463880 Phenylpropanoid HCT medium pass
THsancontig_590483900 Phenylpropanoid HCT medium pass
THsancontig_600492000 Phenylpropanoid HCT medium pass
THsancontig_1140021280 Phenylpropanoid LAC medium pass
THsancontig_1140021400 Phenylpropanoid LAC medium pass
THsancontig_1680094940 Phenylpropanoid LAC medium pass
THsancontig_1680094980 Phenylpropanoid LAC medium pass
THsancontig_1770105560 Phenylpropanoid LAC medium pass
THsancontig_3000278070 Phenylpropanoid LAC medium pass
THsancontig_3230313520 Phenylpropanoid LAC medium pass
THsancontig_3230315660 Phenylpropanoid LAC medium pass
THsancontig_3440356030 Phenylpropanoid LAC medium pass
THsancontig_3450360630 Phenylpropanoid LAC medium pass
THsancontig_3570372260 Phenylpropanoid LAC low borderline
THsancontig_3570372280 Phenylpropanoid LAC medium pass
THsancontig_3940415820 Phenylpropanoid LAC low borderline
THsancontig_3940415850 Phenylpropanoid LAC medium pass
THsancontig_590483760 Phenylpropanoid LAC medium pass
THsancontig_720505590 Phenylpropanoid LAC low borderline