Trapa incisa (trapa_incisa)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.3% Phenylpropanoid pathway 22.66% Alkaloid pathway 19.34% Flavonoid pathway 13.03% Rosmarinic acid pathway 8.52% Steroid pathway 7.16%

Family Distribution

1174 Candidate Genes

BAHD 6.84% C4H 5.19% C3'H/CYP98A 5.12% 4CL 4.42% POD 4.42% CYP76 3.58% NMT 3.44% UGT 3.4%

Other Families 63.57%

More Families (95)

UFGT 90 3.16% 7DLGT 89 3.12% IFS 89 3.12% F3H 74 2.6% STR 69 2.42% T3O 66 2.32% F3'H/CYP75B 55 1.93% SMT1/SMT2/SMT3 55 1.93% DWF4/CYP90B1 53 1.86% BR6OX2/CYP85A2 49 1.72% PAL 48 1.68% LAC 47 1.65% PYKS 46 1.61% CODM/T6ODM 45 1.58% IFR 44 1.54% CSE 39 1.37% H6H 37 1.3% CYP71 37 1.3% CAS 32 1.12% CAD 30 1.05% G8O/G8H 28 0.98% HCT 25 0.88% CYP90D1 24 0.84% IO 23 0.81% SGD 22 0.77% TPS 21 0.74% GS 20 0.7% T16H 20 0.7% TAT 20 0.7% SLS 19 0.67% NCS 19 0.67% PMT 19 0.67% ANR 18 0.63% COMT 18 0.63% RAS 18 0.63% CPD/CYP90A1 18 0.63% TRI/TRII 17 0.6% CCR 15 0.53% BBE 14 0.49% 7DLH 14 0.49% FNS 14 0.49% F5H/CYP84A 14 0.49% GES 13 0.46% 8HGO 12 0.42% COR 12 0.42% CNMT 11 0.39% ANS/LDOX 10 0.35% CPR 10 0.35% LAMT 9 0.32% F3'5'H/CYP75A 9 0.32% ROT3/CYP90C1 9 0.32% GGPPS 9 0.32% CHS 8 0.28% CCoAOMT 8 0.28% HPPR 8 0.28% SMO1/SMO2 8 0.28% BR6OX1/CYP85A1 8 0.28% FPPS 8 0.28% ADC 7 0.25% TYDC_DDC 7 0.25% CYP51G1 7 0.25% MVD 7 0.25% HMGR 7 0.25% MPO 6 0.21% 16OMT 6 0.21% SQS/FDFT1 6 0.21% DET2 6 0.21% PMK 6 0.21% TDC 5 0.18% SQE 5 0.18% MVK 5 0.18% AACT 5 0.18% IDI 5 0.18% ISY 4 0.14% XMT_MXMT_DXMT 4 0.14% CYP719 4 0.14% DFR 4 0.14% HMGS 4 0.14% DXS 4 0.14% CYP80B1 3 0.11% DWF1 3 0.11% HDS/IspG 3 0.11% MCT/IspD 3 0.11% FLS 2 0.07% CHI 2 0.07% FK 2 0.07% DWF7 2 0.07% HYD1 2 0.07% DXR 2 0.07% CMK/IspE 2 0.07% CYP80F1 1 0.04% CPI1 1 0.04% DWF5 1 0.04% MDS/IspF 1 0.04% HDR/IspH 1 0.04%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	344	19	BAHD (145)	View species results
Phenylpropanoid pathway	266	12	POD (116)	View species results
Alkaloid pathway	227	18	NMT (55)	View species results
Flavonoid pathway	153	8	UFGT (86)	View species results
Rosmarinic acid pathway	100	7	C4H (32)	View species results
Steroid pathway	84	11	SMT1/SMT2/SMT3 (30)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	946	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	238	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
trapa_incisa_GWHPCBIN000293	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
trapa_incisa_GWHPCBIN001039	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
trapa_incisa_GWHPCBIN001346	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
trapa_incisa_GWHPCBIN001445	Alkaloid	NMT	low	borderline	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
trapa_incisa_GWHPCBIN001479	Alkaloid	NMT	low	borderline	NMT__00068__sp_Q9XI84_RBCMT_ARATH
trapa_incisa_GWHPCBIN002201	Alkaloid	NMT	medium	pass	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
trapa_incisa_GWHPCBIN003149	Alkaloid	NMT	low	borderline	NMT__00059__sp_Q9M571_PEAMT_SPIOL
trapa_incisa_GWHPCBIN003305	Alkaloid	NMT	medium	pass	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
trapa_incisa_GWHPCBIN003664	Alkaloid	NMT	medium	pass	NMT__00017__sp_F4K1J4_ATXR7_ARATH
trapa_incisa_GWHPCBIN003862	Alkaloid	NMT	medium	pass	NMT__00017__sp_F4K1J4_ATXR7_ARATH
trapa_incisa_GWHPCBIN004211	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
trapa_incisa_GWHPCBIN004404	Alkaloid	NMT	medium	borderline	NMT__00057__sp_Q9FR44_PEAM1_ARATH
trapa_incisa_GWHPCBIN005360	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
trapa_incisa_GWHPCBIN005734	Alkaloid	NMT	medium	pass	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
trapa_incisa_GWHPCBIN005838	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
trapa_incisa_GWHPCBIN006534	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
trapa_incisa_GWHPCBIN007330	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
trapa_incisa_GWHPCBIN007666	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
trapa_incisa_GWHPCBIN007733	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
trapa_incisa_GWHPCBIN007916	Alkaloid	NMT	medium	borderline	NMT__00062__sp_Q9SCP7_NAMT1_ARATH
trapa_incisa_GWHPCBIN008045	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
trapa_incisa_GWHPCBIN008266	Alkaloid	NMT	medium	borderline	NMT__00023__sp_O82210_ANM12_ARATH
trapa_incisa_GWHPCBIN009882	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
trapa_incisa_GWHPCBIN009888	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
trapa_incisa_GWHPCBIN009930	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
trapa_incisa_GWHPCBIN010208	Alkaloid	NMT	medium	pass	NMT__00054__sp_Q9FF80_SUVH1_ARATH
trapa_incisa_GWHPCBIN010811	Alkaloid	NMT	medium	pass	NMT__00069__sp_Q9ZSM8_EZA1_ARATH
trapa_incisa_GWHPCBIN010821	Alkaloid	NMT	medium	borderline	NMT__00057__sp_Q9FR44_PEAM1_ARATH
trapa_incisa_GWHPCBIN011142	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
trapa_incisa_GWHPCBIN011613	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
trapa_incisa_GWHPCBIN011764	Alkaloid	NMT	medium	pass	NMT__00020__sp_O23372_ATXR3_ARATH
trapa_incisa_GWHPCBIN011855	Alkaloid	NMT	medium	pass	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
trapa_incisa_GWHPCBIN011925	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
trapa_incisa_GWHPCBIN012042	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
trapa_incisa_GWHPCBIN013336	Alkaloid	NMT	low	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
trapa_incisa_GWHPCBIN013667	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
trapa_incisa_GWHPCBIN013677	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
trapa_incisa_GWHPCBIN013684	Alkaloid	NMT	low	borderline	NMT__00016__sp_F4JNX3_CMKMT_ARATH
trapa_incisa_GWHPCBIN013803	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
trapa_incisa_GWHPCBIN013949	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
trapa_incisa_GWHPCBIN014083	Alkaloid	NMT	medium	pass	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
trapa_incisa_GWHPCBIN014455	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
trapa_incisa_GWHPCBIN014996	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
trapa_incisa_GWHPCBIN015339	Alkaloid	NMT	low	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
trapa_incisa_GWHPCBIN015434	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
trapa_incisa_GWHPCBIN015601	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
trapa_incisa_GWHPCBIN015604	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
trapa_incisa_GWHPCBIN015624	Alkaloid	NMT	medium	pass	NMT__00021__sp_O64827_SUVR5_ARATH
trapa_incisa_GWHPCBIN015637	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
trapa_incisa_GWHPCBIN016281	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH