Trapa incisa (trapa_incisa)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.3% Phenylpropanoid pathway 22.66% Alkaloid pathway 19.34% Flavonoid pathway 13.03% Rosmarinic acid pathway 8.52% Steroid pathway 7.16%

Family Distribution

1174 Candidate Genes

BAHD 6.84% C4H 5.19% C3'H/CYP98A 5.12% 4CL 4.42% POD 4.42% CYP76 3.58% NMT 3.44% UGT 3.4%

Other Families 63.57%

More Families (95)

UFGT 90 3.16% 7DLGT 89 3.12% IFS 89 3.12% F3H 74 2.6% STR 69 2.42% T3O 66 2.32% F3'H/CYP75B 55 1.93% SMT1/SMT2/SMT3 55 1.93% DWF4/CYP90B1 53 1.86% BR6OX2/CYP85A2 49 1.72% PAL 48 1.68% LAC 47 1.65% PYKS 46 1.61% CODM/T6ODM 45 1.58% IFR 44 1.54% CSE 39 1.37% H6H 37 1.3% CYP71 37 1.3% CAS 32 1.12% CAD 30 1.05% G8O/G8H 28 0.98% HCT 25 0.88% CYP90D1 24 0.84% IO 23 0.81% SGD 22 0.77% TPS 21 0.74% GS 20 0.7% T16H 20 0.7% TAT 20 0.7% SLS 19 0.67% NCS 19 0.67% PMT 19 0.67% ANR 18 0.63% COMT 18 0.63% RAS 18 0.63% CPD/CYP90A1 18 0.63% TRI/TRII 17 0.6% CCR 15 0.53% BBE 14 0.49% 7DLH 14 0.49% FNS 14 0.49% F5H/CYP84A 14 0.49% GES 13 0.46% 8HGO 12 0.42% COR 12 0.42% CNMT 11 0.39% ANS/LDOX 10 0.35% CPR 10 0.35% LAMT 9 0.32% F3'5'H/CYP75A 9 0.32% ROT3/CYP90C1 9 0.32% GGPPS 9 0.32% CHS 8 0.28% CCoAOMT 8 0.28% HPPR 8 0.28% SMO1/SMO2 8 0.28% BR6OX1/CYP85A1 8 0.28% FPPS 8 0.28% ADC 7 0.25% TYDC_DDC 7 0.25% CYP51G1 7 0.25% MVD 7 0.25% HMGR 7 0.25% MPO 6 0.21% 16OMT 6 0.21% SQS/FDFT1 6 0.21% DET2 6 0.21% PMK 6 0.21% TDC 5 0.18% SQE 5 0.18% MVK 5 0.18% AACT 5 0.18% IDI 5 0.18% ISY 4 0.14% XMT_MXMT_DXMT 4 0.14% CYP719 4 0.14% DFR 4 0.14% HMGS 4 0.14% DXS 4 0.14% CYP80B1 3 0.11% DWF1 3 0.11% HDS/IspG 3 0.11% MCT/IspD 3 0.11% FLS 2 0.07% CHI 2 0.07% FK 2 0.07% DWF7 2 0.07% HYD1 2 0.07% DXR 2 0.07% CMK/IspE 2 0.07% CYP80F1 1 0.04% CPI1 1 0.04% DWF5 1 0.04% MDS/IspF 1 0.04% HDR/IspH 1 0.04%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	344	19	BAHD (145)	View species results
Phenylpropanoid pathway	266	12	POD (116)	View species results
Alkaloid pathway	227	18	NMT (55)	View species results
Flavonoid pathway	153	8	UFGT (86)	View species results
Rosmarinic acid pathway	100	7	C4H (32)	View species results
Steroid pathway	84	11	SMT1/SMT2/SMT3 (30)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	946	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	238	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: POD

Gene	Pathway	Family	Confidence	Status	Best Target
trapa_incisa_GWHPCBIN025572	Phenylpropanoid	POD	medium	pass	POD__00010__sp_P84516_PER1_SORBI
trapa_incisa_GWHPCBIN025666	Phenylpropanoid	POD	medium	pass	POD__00006__sp_O22850_GPX3_ARATH
trapa_incisa_GWHPCBIN025861	Phenylpropanoid	POD	medium	pass	POD__00006__sp_O22850_GPX3_ARATH
trapa_incisa_GWHPCBIN026064	Phenylpropanoid	POD	medium	pass	POD__00028__sp_Q9ZVD5_AGO4_ARATH
trapa_incisa_GWHPCBIN026221	Phenylpropanoid	POD	medium	pass	POD__00002__sp_A5H8G4_PER1_MAIZE
trapa_incisa_GWHPCBIN026519	Phenylpropanoid	POD	low	borderline	POD__00016__sp_Q6QPJ6_PRXQ_POPJC
trapa_incisa_GWHPCBIN026701	Phenylpropanoid	POD	medium	pass	POD__00001__sp_A5H452_PER70_MAIZE
trapa_incisa_GWHPCBIN026739	Phenylpropanoid	POD	medium	pass	POD__00028__sp_Q9ZVD5_AGO4_ARATH
trapa_incisa_GWHPCBIN026814	Phenylpropanoid	POD	medium	pass	POD__00027__sp_Q9XIV8_PERN1_TOBAC
trapa_incisa_GWHPCBIN027413	Phenylpropanoid	POD	medium	pass	POD__00026__sp_Q9XEX2_PRX2B_ARATH
trapa_incisa_GWHPCBIN027699	Phenylpropanoid	POD	medium	pass	POD__00028__sp_Q9ZVD5_AGO4_ARATH
trapa_incisa_GWHPCBIN027990	Phenylpropanoid	POD	medium	pass	POD__00001__sp_A5H452_PER70_MAIZE
trapa_incisa_GWHPCBIN028331	Phenylpropanoid	POD	medium	pass	POD__00027__sp_Q9XIV8_PERN1_TOBAC
trapa_incisa_GWHPCBIN028726	Phenylpropanoid	POD	medium	pass	POD__00021__sp_Q9LEH3_PER15_IPOBA
trapa_incisa_GWHPCBIN028974	Phenylpropanoid	POD	medium	pass	POD__00024__sp_Q9SCX8_PPA17_ARATH
trapa_incisa_GWHPCBIN029002	Phenylpropanoid	POD	medium	pass	POD__00024__sp_Q9SCX8_PPA17_ARATH
trapa_incisa_GWHPCBIN029006	Phenylpropanoid	POD	medium	pass	POD__00024__sp_Q9SCX8_PPA17_ARATH
trapa_incisa_GWHPCBIN029007	Phenylpropanoid	POD	medium	pass	POD__00024__sp_Q9SCX8_PPA17_ARATH
trapa_incisa_GWHPCBIN029008	Phenylpropanoid	POD	medium	pass	POD__00024__sp_Q9SCX8_PPA17_ARATH
trapa_incisa_GWHPCBIN029962	Phenylpropanoid	POD	low	borderline	POD__00007__sp_P0C5C9_REHYA_ORYSJ
trapa_incisa_GWHPCBIN030022	Phenylpropanoid	POD	medium	pass	POD__00001__sp_A5H452_PER70_MAIZE
trapa_incisa_GWHPCBIN030545	Phenylpropanoid	POD	medium	pass	POD__00027__sp_Q9XIV8_PERN1_TOBAC
trapa_incisa_GWHPCBIN030933	Phenylpropanoid	POD	medium	pass	POD__00007__sp_P0C5C9_REHYA_ORYSJ
trapa_incisa_GWHPCBIN032007	Phenylpropanoid	POD	medium	pass	POD__00012__sp_Q10N21_APX1_ORYSJ
trapa_incisa_GWHPCBIN032170	Phenylpropanoid	POD	medium	pass	POD__00002__sp_A5H8G4_PER1_MAIZE
trapa_incisa_GWHPCBIN032259	Phenylpropanoid	POD	medium	pass	POD__00005__sp_O22448_GPX5_CHLRE