Trapa incisa (trapa_incisa)
Imported from atlas release summary for Trapa incisa.
1531
Candidate Protein Records
1174
Pathway-Level Records
2849
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2849
Family-Level Calls
BAHD
6.84%
C4H
5.19%
C3'H/CYP98A
5.12%
4CL
4.42%
POD
4.42%
CYP76
3.58%
NMT
3.44%
UGT
3.4%
Other Families
63.57%
More Families (95)
UFGT
90
3.16%
7DLGT
89
3.12%
IFS
89
3.12%
F3H
74
2.6%
STR
69
2.42%
T3O
66
2.32%
F3'H/CYP75B
55
1.93%
SMT1/SMT2/SMT3
55
1.93%
DWF4/CYP90B1
53
1.86%
BR6OX2/CYP85A2
49
1.72%
PAL
48
1.68%
LAC
47
1.65%
PYKS
46
1.61%
CODM/T6ODM
45
1.58%
IFR
44
1.54%
CSE
39
1.37%
H6H
37
1.3%
CYP71
37
1.3%
CAS
32
1.12%
CAD
30
1.05%
G8O/G8H
28
0.98%
HCT
25
0.88%
CYP90D1
24
0.84%
IO
23
0.81%
SGD
22
0.77%
TPS
21
0.74%
GS
20
0.7%
T16H
20
0.7%
TAT
20
0.7%
SLS
19
0.67%
NCS
19
0.67%
PMT
19
0.67%
ANR
18
0.63%
COMT
18
0.63%
RAS
18
0.63%
CPD/CYP90A1
18
0.63%
TRI/TRII
17
0.6%
CCR
15
0.53%
BBE
14
0.49%
7DLH
14
0.49%
FNS
14
0.49%
F5H/CYP84A
14
0.49%
GES
13
0.46%
8HGO
12
0.42%
COR
12
0.42%
CNMT
11
0.39%
ANS/LDOX
10
0.35%
CPR
10
0.35%
LAMT
9
0.32%
F3'5'H/CYP75A
9
0.32%
ROT3/CYP90C1
9
0.32%
GGPPS
9
0.32%
CHS
8
0.28%
CCoAOMT
8
0.28%
HPPR
8
0.28%
SMO1/SMO2
8
0.28%
BR6OX1/CYP85A1
8
0.28%
FPPS
8
0.28%
ADC
7
0.25%
TYDC_DDC
7
0.25%
CYP51G1
7
0.25%
MVD
7
0.25%
HMGR
7
0.25%
MPO
6
0.21%
16OMT
6
0.21%
SQS/FDFT1
6
0.21%
DET2
6
0.21%
PMK
6
0.21%
TDC
5
0.18%
SQE
5
0.18%
MVK
5
0.18%
AACT
5
0.18%
IDI
5
0.18%
ISY
4
0.14%
XMT_MXMT_DXMT
4
0.14%
CYP719
4
0.14%
DFR
4
0.14%
HMGS
4
0.14%
DXS
4
0.14%
CYP80B1
3
0.11%
DWF1
3
0.11%
HDS/IspG
3
0.11%
MCT/IspD
3
0.11%
FLS
2
0.07%
CHI
2
0.07%
FK
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
DXR
2
0.07%
CMK/IspE
2
0.07%
CYP80F1
1
0.04%
CPI1
1
0.04%
DWF5
1
0.04%
MDS/IspF
1
0.04%
HDR/IspH
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 344 | 19 | BAHD (145) | View species results |
| Phenylpropanoid pathway | 266 | 12 | POD (116) | View species results |
| Alkaloid pathway | 227 | 18 | NMT (55) | View species results |
| Flavonoid pathway | 153 | 8 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 100 | 7 | C4H (32) | View species results |
| Steroid pathway | 84 | 11 | SMT1/SMT2/SMT3 (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 946 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 238 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| trapa_incisa_GWHPCBIN026579 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN027116 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN027326 | Rosmarinic Acid | C4H | medium | pass |
| trapa_incisa_GWHPCBIN027432 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN027598 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN027976 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN028005 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN028319 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN028846 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN029313 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN029360 | Rosmarinic Acid | C4H | medium | pass |
| trapa_incisa_GWHPCBIN029572 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN029819 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030257 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030356 | Rosmarinic Acid | C4H | medium | pass |
| trapa_incisa_GWHPCBIN030406 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030420 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030421 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030776 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030777 | Rosmarinic Acid | C4H | medium | pass |
| trapa_incisa_GWHPCBIN030778 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030779 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030783 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN030950 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN031148 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN031406 | Rosmarinic Acid | C4H | low | borderline |
| trapa_incisa_GWHPCBIN000244 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN008640 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN008988 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN009876 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN019044 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN021246 | Rosmarinic Acid | CPR | low | borderline |
| trapa_incisa_GWHPCBIN021450 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN022426 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN022726 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN023592 | Rosmarinic Acid | CPR | medium | pass |
| trapa_incisa_GWHPCBIN002305 | Rosmarinic Acid | HPPR | medium | pass |
| trapa_incisa_GWHPCBIN014366 | Rosmarinic Acid | HPPR | medium | pass |
| trapa_incisa_GWHPCBIN015506 | Rosmarinic Acid | HPPR | medium | pass |
| trapa_incisa_GWHPCBIN019797 | Rosmarinic Acid | HPPR | low | borderline |
| trapa_incisa_GWHPCBIN020489 | Rosmarinic Acid | HPPR | low | borderline |
| trapa_incisa_GWHPCBIN021014 | Rosmarinic Acid | HPPR | medium | pass |
| trapa_incisa_GWHPCBIN031146 | Rosmarinic Acid | HPPR | medium | pass |
| trapa_incisa_GWHPCBIN031167 | Rosmarinic Acid | HPPR | medium | pass |
| trapa_incisa_GWHPCBIN006768 | Rosmarinic Acid | PAL | high | pass |
| trapa_incisa_GWHPCBIN007527 | Rosmarinic Acid | PAL | high | pass |
| trapa_incisa_GWHPCBIN011096 | Rosmarinic Acid | PAL | high | pass |
| trapa_incisa_GWHPCBIN011097 | Rosmarinic Acid | PAL | low | borderline |
| trapa_incisa_GWHPCBIN012920 | Rosmarinic Acid | PAL | high | pass |
| trapa_incisa_GWHPCBIN013111 | Rosmarinic Acid | PAL | medium | pass |