PlantSME Plant secondary metabolism enzyme database

Typha angustifolia (typha_angustifolia)

Imported from atlas release summary for Typha angustifolia.

1135
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.78% Phenylpropanoid pathway 25.64% Alkaloid pathway 21.23% Flavonoid pathway 11.01% Rosmarinic acid pathway 9.25% Steroid pathway 6.08%
Family Distribution
BAHD 7.04% C3'H/CYP98A 6.07% POD 5.64% C4H 5.56% 4CL 3.97% T3O 3.34% CYP76 3.34% IFS 3.27%
Other Families 61.78%
More Families (93)
UGT 81 3.15% 7DLGT 73 2.84% UFGT 72 2.8% F3H 64 2.49% DWF4/CYP90B1 57 2.22% F3'H/CYP75B 56 2.18% NMT 54 2.1% STR 52 2.02% RAS 50 1.94% BR6OX2/CYP85A2 50 1.94% CYP71 44 1.71% SMT1/SMT2/SMT3 42 1.63% PMT 39 1.52% HCT 38 1.48% CSE 36 1.4% TRI/TRII 35 1.36% CAD 33 1.28% CODM/T6ODM 32 1.24% LAC 31 1.21% IFR 28 1.09% H6H 26 1.01% CAS 25 0.97% CYP90D1 24 0.93% T16H 23 0.89% FNS 22 0.86% GS 20 0.78% PYKS 19 0.74% TPS 19 0.74% IO 18 0.7% SGD 18 0.7% PAL 18 0.7% SLS 17 0.66% GES 17 0.66% CYP51G1 17 0.66% ANR 16 0.62% NCS 15 0.58% CHS 15 0.58% COMT 14 0.54% CNMT 13 0.51% CCR 13 0.51% CCoAOMT 13 0.51% BR6OX1/CYP85A1 13 0.51% COR 11 0.43% G8O/G8H 11 0.43% LAMT 10 0.39% BBE 10 0.39% 16OMT 9 0.35% DFR 9 0.35% AACT 8 0.31% 8HGO 7 0.27% 7DLH 7 0.27% ADC 7 0.27% F5H/CYP84A 7 0.27% TAT 7 0.27% SQS/FDFT1 7 0.27% CYP719 6 0.23% F3'5'H/CYP75A 6 0.23% ROT3/CYP90C1 6 0.23% SMO1/SMO2 6 0.23% MPO 5 0.19% CHI 5 0.19% CPR 5 0.19% CPD/CYP90A1 5 0.19% GGPPS 5 0.19% MVK 5 0.19% HPPR 4 0.16% DWF1 4 0.16% DET2 4 0.16% FPPS 4 0.16% CYP80B1 3 0.12% TDC 3 0.12% DWF5 3 0.12% HMGR 3 0.12% DXS 3 0.12% MVD 3 0.12% TYDC_DDC 2 0.08% ISY 2 0.08% ANS/LDOX 2 0.08% FK 2 0.08% DWF7 2 0.08% SQE 2 0.08% HYD1 2 0.08% HDR/IspH 2 0.08% MCT/IspD 2 0.08% HMGS 2 0.08% IDI 2 0.08% FLS 1 0.04% CPI1 1 0.04% PMK 1 0.04% CMK/IspE 1 0.04% DXR 1 0.04% MDS/IspF 1 0.04% HDS/IspG 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 304 19 BAHD (141) View species results
Phenylpropanoid pathway 291 11 POD (138) View species results
Alkaloid pathway 241 19 7DLGT (30) View species results
Flavonoid pathway 125 9 UFGT (65) View species results
Rosmarinic acid pathway 105 7 C4H (39) View species results
Steroid pathway 69 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 925 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 269 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
typha_angustifolia_xp00218 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
typha_angustifolia_xp00219 Terpenoid CYP76 medium pass CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
typha_angustifolia_xp00544 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
typha_angustifolia_xp00620 Terpenoid CYP76 medium pass CYP76__00014__sp_I3PFJ5_C76AD_BETVU
typha_angustifolia_xp00699 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
typha_angustifolia_xp01399 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
typha_angustifolia_xp01568 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
typha_angustifolia_xp01646 Terpenoid CYP76 low borderline CYP76__00015__sp_P0DKI2_C76AN_BETVU
typha_angustifolia_xp02018 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
typha_angustifolia_xp02243 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
typha_angustifolia_xp02244 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
typha_angustifolia_xp02245 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
typha_angustifolia_xp02246 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
typha_angustifolia_xp03812 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
typha_angustifolia_xp03851 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
typha_angustifolia_xp04786 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
typha_angustifolia_xp04838 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
typha_angustifolia_xp05450 Terpenoid CYP76 medium pass CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
typha_angustifolia_xp05758 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
typha_angustifolia_xp05892 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
typha_angustifolia_xp06362 Terpenoid CYP76 medium borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
typha_angustifolia_xp06923 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
typha_angustifolia_xp07697 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
typha_angustifolia_xp07977 Terpenoid CYP76 low borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
typha_angustifolia_xp08080 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
typha_angustifolia_xp09034 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
typha_angustifolia_xp09708 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
typha_angustifolia_xp09716 Terpenoid CYP76 medium pass CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
typha_angustifolia_xp09895 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
typha_angustifolia_xp10178 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
typha_angustifolia_xp10656 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
typha_angustifolia_xp10657 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
typha_angustifolia_xp10659 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
typha_angustifolia_xp10661 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
typha_angustifolia_xp11703 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
typha_angustifolia_xp11848 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
typha_angustifolia_xp12142 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
typha_angustifolia_xp12405 Terpenoid CYP76 medium pass CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
typha_angustifolia_xp12406 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
typha_angustifolia_xp12407 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
typha_angustifolia_xp12408 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
typha_angustifolia_xp12409 Terpenoid CYP76 medium pass CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
typha_angustifolia_xp12412 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
typha_angustifolia_xp12469 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
typha_angustifolia_xp12604 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
typha_angustifolia_xp12944 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
typha_angustifolia_xp13088 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
typha_angustifolia_xp13330 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
typha_angustifolia_xp13673 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
typha_angustifolia_xp13675 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO