Typha angustifolia (typha_angustifolia)
Imported from atlas release summary for Typha angustifolia.
1135
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1135
Candidate Genes
BAHD
7.04%
C3'H/CYP98A
6.07%
POD
5.64%
C4H
5.56%
4CL
3.97%
T3O
3.34%
CYP76
3.34%
IFS
3.27%
Other Families
61.78%
More Families (93)
UGT
81
3.15%
7DLGT
73
2.84%
UFGT
72
2.8%
F3H
64
2.49%
DWF4/CYP90B1
57
2.22%
F3'H/CYP75B
56
2.18%
NMT
54
2.1%
STR
52
2.02%
RAS
50
1.94%
BR6OX2/CYP85A2
50
1.94%
CYP71
44
1.71%
SMT1/SMT2/SMT3
42
1.63%
PMT
39
1.52%
HCT
38
1.48%
CSE
36
1.4%
TRI/TRII
35
1.36%
CAD
33
1.28%
CODM/T6ODM
32
1.24%
LAC
31
1.21%
IFR
28
1.09%
H6H
26
1.01%
CAS
25
0.97%
CYP90D1
24
0.93%
T16H
23
0.89%
FNS
22
0.86%
GS
20
0.78%
PYKS
19
0.74%
TPS
19
0.74%
IO
18
0.7%
SGD
18
0.7%
PAL
18
0.7%
SLS
17
0.66%
GES
17
0.66%
CYP51G1
17
0.66%
ANR
16
0.62%
NCS
15
0.58%
CHS
15
0.58%
COMT
14
0.54%
CNMT
13
0.51%
CCR
13
0.51%
CCoAOMT
13
0.51%
BR6OX1/CYP85A1
13
0.51%
COR
11
0.43%
G8O/G8H
11
0.43%
LAMT
10
0.39%
BBE
10
0.39%
16OMT
9
0.35%
DFR
9
0.35%
AACT
8
0.31%
8HGO
7
0.27%
7DLH
7
0.27%
ADC
7
0.27%
F5H/CYP84A
7
0.27%
TAT
7
0.27%
SQS/FDFT1
7
0.27%
CYP719
6
0.23%
F3'5'H/CYP75A
6
0.23%
ROT3/CYP90C1
6
0.23%
SMO1/SMO2
6
0.23%
MPO
5
0.19%
CHI
5
0.19%
CPR
5
0.19%
CPD/CYP90A1
5
0.19%
GGPPS
5
0.19%
MVK
5
0.19%
HPPR
4
0.16%
DWF1
4
0.16%
DET2
4
0.16%
FPPS
4
0.16%
CYP80B1
3
0.12%
TDC
3
0.12%
DWF5
3
0.12%
HMGR
3
0.12%
DXS
3
0.12%
MVD
3
0.12%
TYDC_DDC
2
0.08%
ISY
2
0.08%
ANS/LDOX
2
0.08%
FK
2
0.08%
DWF7
2
0.08%
SQE
2
0.08%
HYD1
2
0.08%
HDR/IspH
2
0.08%
MCT/IspD
2
0.08%
HMGS
2
0.08%
IDI
2
0.08%
FLS
1
0.04%
CPI1
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
DXR
1
0.04%
MDS/IspF
1
0.04%
HDS/IspG
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 304 | 19 | BAHD (141) | View species results |
| Phenylpropanoid pathway | 291 | 11 | POD (138) | View species results |
| Alkaloid pathway | 241 | 19 | 7DLGT (30) | View species results |
| Flavonoid pathway | 125 | 9 | UFGT (65) | View species results |
| Rosmarinic acid pathway | 105 | 7 | C4H (39) | View species results |
| Steroid pathway | 69 | 12 | SMT1/SMT2/SMT3 (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 925 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 269 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| typha_angustifolia_xp00036 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| typha_angustifolia_xp01375 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| typha_angustifolia_xp02423 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp04520 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| typha_angustifolia_xp05136 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| typha_angustifolia_xp07665 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp10337 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| typha_angustifolia_xp10609 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp11955 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| typha_angustifolia_xp11956 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp11957 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp11958 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp12253 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| typha_angustifolia_xp13487 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| typha_angustifolia_xp13488 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| typha_angustifolia_xp13490 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| typha_angustifolia_xp14411 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp15345 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| typha_angustifolia_xp17728 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| typha_angustifolia_xp19905 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| typha_angustifolia_xp19906 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| typha_angustifolia_xp19907 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| typha_angustifolia_xp19908 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| typha_angustifolia_xp19909 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| typha_angustifolia_xp19910 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| typha_angustifolia_xp19911 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| typha_angustifolia_xp19912 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| typha_angustifolia_xp19913 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| typha_angustifolia_xp20181 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp21644 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| typha_angustifolia_xp21783 | Alkaloid | TRI/TRII | medium | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| typha_angustifolia_xp22249 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| typha_angustifolia_xp22366 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| typha_angustifolia_xp22982 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| typha_angustifolia_xp23134 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |