Vaccinium darrowii (vaccinium_darrowii)
/
Imported from atlas release summary for Vaccinium darrowii.
2318
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2318
Candidate Genes
C4H
6.65%
C3'H/CYP98A
6.1%
UGT
5.92%
7DLGT
5.23%
UFGT
5.12%
BAHD
4.81%
CYP76
4.52%
IFS
4.18%
Other Families
57.47%
More Families (96)
T3O
189
3.43%
4CL
156
2.83%
F3H
142
2.58%
POD
142
2.58%
DWF4/CYP90B1
137
2.49%
F3'H/CYP75B
109
1.98%
CAD
98
1.78%
BR6OX2/CYP85A2
91
1.65%
CAS
87
1.58%
H6H
85
1.54%
STR
83
1.51%
NMT
82
1.49%
CODM/T6ODM
80
1.45%
IO
77
1.4%
TPS
72
1.31%
GES
68
1.23%
T16H
64
1.16%
HCT
60
1.09%
GS
59
1.07%
CYP71
57
1.04%
LAC
54
0.98%
SMT1/SMT2/SMT3
48
0.87%
BR6OX1/CYP85A1
47
0.85%
TRI/TRII
45
0.82%
TAT
45
0.82%
CYP90D1
45
0.82%
RAS
43
0.78%
G8O/G8H
42
0.76%
IFR
40
0.73%
COMT
38
0.69%
ANR
37
0.67%
PYKS
34
0.62%
SGD
33
0.6%
F3'5'H/CYP75A
33
0.6%
F5H/CYP84A
33
0.6%
BBE
31
0.56%
PMT
30
0.54%
CSE
30
0.54%
CCR
29
0.53%
FNS
28
0.51%
CYP51G1
28
0.51%
SLS
27
0.49%
CPD/CYP90A1
26
0.47%
16OMT
24
0.44%
7DLH
21
0.38%
8HGO
20
0.36%
COR
20
0.36%
MPO
19
0.35%
ANS/LDOX
19
0.35%
PAL
18
0.33%
DFR
16
0.29%
ROT3/CYP90C1
13
0.24%
CHS
12
0.22%
SMO1/SMO2
12
0.22%
CYP80B1
11
0.2%
LAMT
11
0.2%
NCS
10
0.18%
AACT
10
0.18%
CYP719
9
0.16%
CPR
8
0.15%
GGPPS
8
0.15%
FPPS
8
0.15%
CNMT
7
0.13%
HPPR
7
0.13%
DET2
7
0.13%
MVD
7
0.13%
DXS
6
0.11%
MVK
6
0.11%
ISY
5
0.09%
SQS/FDFT1
5
0.09%
TYDC_DDC
4
0.07%
CHI
4
0.07%
CCoAOMT
4
0.07%
SQE
4
0.07%
DWF7
4
0.07%
GPPS
4
0.07%
HMGR
4
0.07%
TDC
3
0.05%
ODC
3
0.05%
DXR
3
0.05%
MDS/IspF
3
0.05%
HYD1
2
0.04%
DWF5
2
0.04%
FK
2
0.04%
DWF1
2
0.04%
IDI
2
0.04%
MCT/IspD
2
0.04%
HDR/IspH
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
XMT_MXMT_DXMT
1
0.02%
ADC
1
0.02%
CYP80F1
1
0.02%
CMK/IspE
1
0.02%
PMK
1
0.02%
HMGS
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 726 | 19 | UGT (305) | View species results |
| Alkaloid pathway | 506 | 24 | 7DLGT (142) | View species results |
| Phenylpropanoid pathway | 373 | 11 | POD (133) | View species results |
| Flavonoid pathway | 352 | 14 | UFGT (263) | View species results |
| Rosmarinic acid pathway | 223 | 7 | C4H (109) | View species results |
| Steroid pathway | 138 | 13 | CAS (77) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2241 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 368 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| vaccinium_darrowii_Vadar_g16568.t1 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| vaccinium_darrowii_Vadar_g21917.t1 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| vaccinium_darrowii_Vadar_g24860.t1 | Alkaloid | COR | medium | pass | COR__00005__sp_Q9SQ70_COR11_PAPSO |
| vaccinium_darrowii_Vadar_g24861.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g24862.t1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| vaccinium_darrowii_Vadar_g32153.t1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| vaccinium_darrowii_Vadar_g33126.t1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| vaccinium_darrowii_Vadar_g37034.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g37038.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g37040.t1 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| vaccinium_darrowii_Vadar_g37041.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g37126.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g39444.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g44085.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g44116.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g44117.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g45406.t1 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| vaccinium_darrowii_Vadar_g45408.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g604.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| vaccinium_darrowii_Vadar_g605.t1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |