PlantSME Plant secondary metabolism enzyme database

Vaccinium darrowii (vaccinium_darrowii)

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Imported from atlas release summary for Vaccinium darrowii.

2318
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.32% Alkaloid pathway 21.83% Phenylpropanoid pathway 16.09% Flavonoid pathway 15.19% Rosmarinic acid pathway 9.62% Steroid pathway 5.95%
Family Distribution
C4H 6.65% C3'H/CYP98A 6.1% UGT 5.92% 7DLGT 5.23% UFGT 5.12% BAHD 4.81% CYP76 4.52% IFS 4.18%
Other Families 57.47%
More Families (96)
T3O 189 3.43% 4CL 156 2.83% F3H 142 2.58% POD 142 2.58% DWF4/CYP90B1 137 2.49% F3'H/CYP75B 109 1.98% CAD 98 1.78% BR6OX2/CYP85A2 91 1.65% CAS 87 1.58% H6H 85 1.54% STR 83 1.51% NMT 82 1.49% CODM/T6ODM 80 1.45% IO 77 1.4% TPS 72 1.31% GES 68 1.23% T16H 64 1.16% HCT 60 1.09% GS 59 1.07% CYP71 57 1.04% LAC 54 0.98% SMT1/SMT2/SMT3 48 0.87% BR6OX1/CYP85A1 47 0.85% TRI/TRII 45 0.82% TAT 45 0.82% CYP90D1 45 0.82% RAS 43 0.78% G8O/G8H 42 0.76% IFR 40 0.73% COMT 38 0.69% ANR 37 0.67% PYKS 34 0.62% SGD 33 0.6% F3'5'H/CYP75A 33 0.6% F5H/CYP84A 33 0.6% BBE 31 0.56% PMT 30 0.54% CSE 30 0.54% CCR 29 0.53% FNS 28 0.51% CYP51G1 28 0.51% SLS 27 0.49% CPD/CYP90A1 26 0.47% 16OMT 24 0.44% 7DLH 21 0.38% 8HGO 20 0.36% COR 20 0.36% MPO 19 0.35% ANS/LDOX 19 0.35% PAL 18 0.33% DFR 16 0.29% ROT3/CYP90C1 13 0.24% CHS 12 0.22% SMO1/SMO2 12 0.22% CYP80B1 11 0.2% LAMT 11 0.2% NCS 10 0.18% AACT 10 0.18% CYP719 9 0.16% CPR 8 0.15% GGPPS 8 0.15% FPPS 8 0.15% CNMT 7 0.13% HPPR 7 0.13% DET2 7 0.13% MVD 7 0.13% DXS 6 0.11% MVK 6 0.11% ISY 5 0.09% SQS/FDFT1 5 0.09% TYDC_DDC 4 0.07% CHI 4 0.07% CCoAOMT 4 0.07% SQE 4 0.07% DWF7 4 0.07% GPPS 4 0.07% HMGR 4 0.07% TDC 3 0.05% ODC 3 0.05% DXR 3 0.05% MDS/IspF 3 0.05% HYD1 2 0.04% DWF5 2 0.04% FK 2 0.04% DWF1 2 0.04% IDI 2 0.04% MCT/IspD 2 0.04% HDR/IspH 2 0.04% 6OMT_4OMT_SOMT 1 0.02% XMT_MXMT_DXMT 1 0.02% ADC 1 0.02% CYP80F1 1 0.02% CMK/IspE 1 0.02% PMK 1 0.02% HMGS 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 726 19 UGT (305) View species results
Alkaloid pathway 506 24 7DLGT (142) View species results
Phenylpropanoid pathway 373 11 POD (133) View species results
Flavonoid pathway 352 14 UFGT (263) View species results
Rosmarinic acid pathway 223 7 C4H (109) View species results
Steroid pathway 138 13 CAS (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2241 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 368 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF7
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Gene Pathway Family Confidence Status Best Target
vaccinium_darrowii_Vadar_g20376.t1 Steroid DWF7 medium pass DWF7__00001__sp_Q39208_SC5D1_ARATH
vaccinium_darrowii_Vadar_g29205.t1 Steroid DWF7 medium pass DWF7__00001__sp_Q39208_SC5D1_ARATH
vaccinium_darrowii_Vadar_g29207.t1 Steroid DWF7 medium pass DWF7__00001__sp_Q39208_SC5D1_ARATH
vaccinium_darrowii_Vadar_g29213.t1 Steroid DWF7 medium pass DWF7__00001__sp_Q39208_SC5D1_ARATH