Vanilla planifolia (vanilla_planifolia)
Imported from atlas release summary for Vanilla planifolia.
1132
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1132
Candidate Genes
C4H
6.53%
C3'H/CYP98A
5.81%
BAHD
5.05%
4CL
4.64%
POD
3.88%
IFS
3.81%
UGT
3.33%
CYP76
3.3%
Other Families
63.66%
More Families (93)
T3O
95
3.26%
7DLGT
86
2.95%
F3H
85
2.92%
UFGT
80
2.75%
NMT
73
2.51%
CYP71
70
2.4%
STR
61
2.1%
F3'H/CYP75B
61
2.1%
H6H
60
2.06%
DWF4/CYP90B1
58
1.99%
CAD
50
1.72%
CODM/T6ODM
44
1.51%
BR6OX2/CYP85A2
39
1.34%
IFR
37
1.27%
T16H
36
1.24%
COMT
35
1.2%
G8O/G8H
32
1.1%
GS
32
1.1%
PYKS
31
1.06%
CAS
31
1.06%
TPS
31
1.06%
GES
30
1.03%
PAL
30
1.03%
SMT1/SMT2/SMT3
30
1.03%
CYP90D1
28
0.96%
LAC
26
0.89%
CYP51G1
25
0.86%
CSE
24
0.82%
SLS
23
0.79%
FNS
23
0.79%
RAS
23
0.79%
TRI/TRII
22
0.76%
HCT
20
0.69%
SGD
19
0.65%
16OMT
19
0.65%
IO
18
0.62%
ANR
18
0.62%
CPD/CYP90A1
18
0.62%
8HGO
17
0.58%
F5H/CYP84A
17
0.58%
CCR
17
0.58%
F3'5'H/CYP75A
16
0.55%
PMT
14
0.48%
CHS
13
0.45%
MPO
12
0.41%
DFR
12
0.41%
CCoAOMT
12
0.41%
CNMT
11
0.38%
ANS/LDOX
11
0.38%
BR6OX1/CYP85A1
11
0.38%
CPR
10
0.34%
BBE
9
0.31%
NCS
8
0.27%
COR
8
0.27%
FPPS
8
0.27%
CYP719
7
0.24%
7DLH
7
0.24%
GGPPS
7
0.24%
CYP80B1
6
0.21%
SMO1/SMO2
6
0.21%
ROT3/CYP90C1
6
0.21%
AACT
6
0.21%
FLS
5
0.17%
SQS/FDFT1
5
0.17%
MVK
5
0.17%
MVD
5
0.17%
HMGR
5
0.17%
TAT
4
0.14%
DET2
4
0.14%
ADC
3
0.1%
TYDC_DDC
3
0.1%
ISY
3
0.1%
LAMT
3
0.1%
FK
3
0.1%
DWF5
3
0.1%
MCT/IspD
3
0.1%
6OMT_4OMT_SOMT
2
0.07%
CHI
2
0.07%
SQE
2
0.07%
HYD1
2
0.07%
CPI1
2
0.07%
DXR
2
0.07%
PMK
2
0.07%
DXS
2
0.07%
TDC
1
0.03%
XMT_MXMT_DXMT
1
0.03%
HPPR
1
0.03%
DWF7
1
0.03%
MDS/IspF
1
0.03%
HMGS
1
0.03%
HDS/IspG
1
0.03%
HDR/IspH
1
0.03%
CMK/IspE
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 306 | 18 | BAHD (116) | View species results |
| Alkaloid pathway | 259 | 23 | NMT (44) | View species results |
| Phenylpropanoid pathway | 258 | 13 | POD (102) | View species results |
| Flavonoid pathway | 146 | 12 | UFGT (68) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 57 | 11 | CAS (21) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1139 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 190 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| KAG0485312.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| KAG0485317.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| KAG0485893.1[Vanilla | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| KAG0488233.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| KAG0488337.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| KAG0488998.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| KAG0488999.1[Vanilla | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| KAG0489308.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| KAG0489350.1[Vanilla | Alkaloid | NMT | medium | borderline | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| KAG0489398.1[Vanilla | Alkaloid | NMT | low | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| KAG0491614.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| KAG0493087.1[Vanilla | Alkaloid | NMT | medium | borderline | NMT__00029__sp_Q42963_PMT1_TOBAC |
| KAG0493088.1[Vanilla | Alkaloid | NMT | low | borderline | NMT__00065__sp_Q9SEH7_PMT2_TOBAC |
| KAG0495711.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| KAG0495793.1[Vanilla | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| KAG0496103.1[Vanilla | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| KAG0496104.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| KAG0496105.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| KAG0496252.1[Vanilla | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| KAG0496384.1[Vanilla | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| KAG0497008.1[Vanilla | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| KAG0497828.1[Vanilla | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| KAG0499454.1[Vanilla | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |