PlantSME Plant secondary metabolism enzyme database

Vanilla planifolia (vanilla_planifolia)

Imported from atlas release summary for Vanilla planifolia.

1132
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 306 18 BAHD (116) View species results
Alkaloid pathway 259 23 NMT (44) View species results
Phenylpropanoid pathway 258 13 POD (102) View species results
Flavonoid pathway 146 12 UFGT (68) View species results
Rosmarinic acid pathway 106 7 C4H (42) View species results
Steroid pathway 57 11 CAS (21) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1139 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 190 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
KAG0455199.1[Vanilla Alkaloid SLS medium pass
KAG0455200.1[Vanilla Alkaloid SLS medium borderline
KAG0457095.1[Vanilla Alkaloid SLS medium borderline
KAG0457913.1[Vanilla Alkaloid SLS low borderline
KAG0458017.1[Vanilla Alkaloid SLS medium borderline
KAG0458115.1[Vanilla Alkaloid SLS medium borderline
KAG0458117.1[Vanilla Alkaloid SLS medium borderline
KAG0458138.1[Vanilla Alkaloid SLS medium borderline
KAG0477439.1[Vanilla Alkaloid SLS medium pass
KAG0477440.1[Vanilla Alkaloid SLS medium borderline
KAG0480973.1[Vanilla Alkaloid SLS medium borderline
KAG0484579.1[Vanilla Alkaloid SLS medium borderline
KAG0485967.1[Vanilla Alkaloid SLS medium borderline
KAG0487876.1[Vanilla Alkaloid SLS medium borderline
KAG0489191.1[Vanilla Alkaloid SLS medium borderline
KAG0491761.1[Vanilla Alkaloid SLS medium borderline
KAG0491765.1[Vanilla Alkaloid SLS low borderline
KAG0492643.1[Vanilla Alkaloid SLS medium borderline
KAG0492644.1[Vanilla Alkaloid SLS medium borderline
KAG0496525.1[Vanilla Alkaloid SLS medium borderline
KAG0496858.1[Vanilla Alkaloid SLS medium borderline
KAG0498606.1[Vanilla Alkaloid SLS medium borderline
KAG0499500.1[Vanilla Alkaloid SLS medium borderline