Vernicia fordii (vernicia_fordii)
Imported from atlas release summary for Vernicia fordii.
2274
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2274
Candidate Genes
C4H
5.99%
BAHD
5.86%
C3'H/CYP98A
5.77%
4CL
4.06%
IFS
4.05%
UGT
3.87%
CYP76
3.64%
T3O
3.62%
Other Families
63.14%
More Families (97)
7DLGT
184
3.28%
UFGT
178
3.17%
F3H
176
3.14%
POD
166
2.96%
NMT
148
2.64%
DWF4/CYP90B1
140
2.5%
CAD
111
1.98%
CAS
102
1.82%
F3'H/CYP75B
98
1.75%
CODM/T6ODM
95
1.69%
BR6OX2/CYP85A2
92
1.64%
TRI/TRII
89
1.59%
SMT1/SMT2/SMT3
89
1.59%
CYP71
87
1.55%
STR
83
1.48%
H6H
81
1.44%
CYP90D1
63
1.12%
GS
62
1.1%
TPS
61
1.09%
GES
57
1.02%
IFR
57
1.02%
COMT
57
1.02%
T16H
55
0.98%
CSE
51
0.91%
SGD
49
0.87%
LAC
48
0.86%
ANR
44
0.78%
TAT
41
0.73%
16OMT
38
0.68%
RAS
38
0.68%
IO
37
0.66%
NCS
34
0.61%
HCT
33
0.59%
8HGO
32
0.57%
LAMT
31
0.55%
FNS
31
0.55%
CCR
31
0.55%
BBE
30
0.53%
COR
29
0.52%
G8O/G8H
29
0.52%
SLS
28
0.5%
BR6OX1/CYP85A1
28
0.5%
7DLH
27
0.48%
PMT
27
0.48%
PAL
27
0.48%
MPO
24
0.43%
SQE
24
0.43%
F3'5'H/CYP75A
22
0.39%
PYKS
21
0.37%
ROT3/CYP90C1
21
0.37%
CYP51G1
21
0.37%
CPD/CYP90A1
20
0.36%
CNMT
19
0.34%
DXS
19
0.34%
F5H/CYP84A
15
0.27%
DFR
14
0.25%
AACT
14
0.25%
ANS/LDOX
12
0.21%
CCoAOMT
12
0.21%
TYDC_DDC
11
0.2%
CPR
11
0.2%
ISY
10
0.18%
MVK
10
0.18%
CYP719
9
0.16%
CHS
9
0.16%
FPPS
9
0.16%
CYP80B1
8
0.14%
CHI
8
0.14%
MCT/IspD
8
0.14%
HMGR
8
0.14%
GGPPS
8
0.14%
XMT_MXMT_DXMT
7
0.12%
HPPR
7
0.12%
SMO1/SMO2
7
0.12%
HYD1
6
0.11%
SQS/FDFT1
6
0.11%
ODC
5
0.09%
MVD
5
0.09%
CMK/IspE
5
0.09%
CPI1
4
0.07%
6OMT_4OMT_SOMT
3
0.05%
DET2
3
0.05%
DWF5
3
0.05%
ADC
2
0.04%
TDC
2
0.04%
DWF1
2
0.04%
HMGS
2
0.04%
IDI
2
0.04%
HDR/IspH
2
0.04%
DXR
2
0.04%
CYP80F1
1
0.02%
FLS
1
0.02%
DWF7
1
0.02%
FK
1
0.02%
PMK
1
0.02%
HDS/IspG
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 661 | 18 | BAHD (268) | View species results |
| Alkaloid pathway | 495 | 25 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 436 | 12 | POD (154) | View species results |
| Flavonoid pathway | 264 | 12 | UFGT (168) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (89) | View species results |
| Steroid pathway | 207 | 12 | CAS (90) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2095 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 400 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| VforGWHAAEU000135740281260.1 | Flavonoid | 4CL | medium | pass | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| VforGWHAAEU000136410284610.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| VforGWHAAEU000136410284610.2 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| VforGWHAAEU000136410284610.3 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| VforGWHAAEU000137740287820.1 | Flavonoid | 4CL | low | borderline | 4CL__00004__sp_O24146_4CL2_TOBAC |
| VforGWHAAEU000137740288030.1 | Flavonoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| VforGWHAAEU000143630309320.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| VforGWHAAEU000144190310910.1 | Flavonoid | 4CL | low | borderline | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| VforGWHAAEU000144190310910.2 | Flavonoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| VforGWHAAEU000144190310910.3 | Flavonoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| VforGWHAAEU000161960357360.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| VforGWHAAEU000161960357360.2 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| VforGWHAAEU000161960357360.3 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| VforGWHAAEU000166060366350.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| VforGWHAAEU000169510376700.1 | Flavonoid | 4CL | medium | pass | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| VforGWHAAEU000169510376700.2 | Flavonoid | 4CL | medium | pass | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| VforGWHAAEU000169510376700.3 | Flavonoid | 4CL | medium | pass | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| VforGWHAAEU000172950386330.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000173510387450.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000173510387450.2 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000174730390470.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| VforGWHAAEU000174730390750.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| VforGWHAAEU000176980395870.1 | Flavonoid | 4CL | low | borderline | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| VforGWHAAEU000192260433200.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| VforGWHAAEU000206130464570.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| VforGWHAAEU000206130464600.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| VforGWHAAEU000006660011220.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| VforGWHAAEU000022660041030.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| VforGWHAAEU000023330042630.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| VforGWHAAEU000023330042630.2 | Phenylpropanoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| VforGWHAAEU000027210049450.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| VforGWHAAEU000053200089360.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000053200089360.2 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000053200089360.3 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000053200089360.4 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000053200089360.5 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000053200089360.6 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| VforGWHAAEU000097620153500.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| VforGWHAAEU000097620153500.2 | Phenylpropanoid | 4CL | medium | pass | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| VforGWHAAEU000097620153500.3 | Phenylpropanoid | 4CL | medium | pass | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| VforGWHAAEU000097620153500.4 | Phenylpropanoid | 4CL | medium | pass | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| VforGWHAAEU000097620153500.5 | Phenylpropanoid | 4CL | low | borderline | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| VforGWHAAEU000097620153500.6 | Phenylpropanoid | 4CL | low | borderline | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| VforGWHAAEU000097620153500.7 | Phenylpropanoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| VforGWHAAEU000097620153500.8 | Phenylpropanoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| VforGWHAAEU000099960157490.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| VforGWHAAEU000099960157490.2 | Phenylpropanoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| VforGWHAAEU000103840162300.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| VforGWHAAEU000109930167410.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| VforGWHAAEU000118140179080.3 | Phenylpropanoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |