PlantSME Plant secondary metabolism enzyme database

Vernicia fordii (vernicia_fordii)

Imported from atlas release summary for Vernicia fordii.

2274
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 661 18 BAHD (268) View species results
Alkaloid pathway 495 25 7DLGT (85) View species results
Phenylpropanoid pathway 436 12 POD (154) View species results
Flavonoid pathway 264 12 UFGT (168) View species results
Rosmarinic acid pathway 211 7 C4H (89) View species results
Steroid pathway 207 12 CAS (90) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2095 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 400 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
Reset
Gene Pathway Family Confidence Status Best Target
VforGWHAAEU000012440021240.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000026660047820.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000083300135260.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000083300135310.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000083300135320.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000083300135330.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000100960158800.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000119300188730.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000122390210040.2 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000122410210280.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000123970221210.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000123970221210.2 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000123970221210.3 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000123970221210.4 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000130630259470.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000134960277540.1 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
VforGWHAAEU000134960277550.1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000134960277560.1 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
VforGWHAAEU000140640297810.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000140640297810.3 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000153520336450.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000153970337820.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000154060338670.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000162290358180.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000162290358180.4 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000183820413480.1 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
VforGWHAAEU000187050420720.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000189500427420.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000189500427430.2 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VforGWHAAEU000206130464250.1 Alkaloid NCS low borderline NCS__00002__sp_A2A1A1_NCS2_COPJA
VforGWHAAEU000206130464270.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000206130464280.1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000206130464310.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VforGWHAAEU000206130465130.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO