Vernicia fordii (vernicia_fordii)
Imported from atlas release summary for Vernicia fordii.
2274
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2274
Candidate Genes
C4H
5.99%
BAHD
5.86%
C3'H/CYP98A
5.77%
4CL
4.06%
IFS
4.05%
UGT
3.87%
CYP76
3.64%
T3O
3.62%
Other Families
63.14%
More Families (97)
7DLGT
184
3.28%
UFGT
178
3.17%
F3H
176
3.14%
POD
166
2.96%
NMT
148
2.64%
DWF4/CYP90B1
140
2.5%
CAD
111
1.98%
CAS
102
1.82%
F3'H/CYP75B
98
1.75%
CODM/T6ODM
95
1.69%
BR6OX2/CYP85A2
92
1.64%
TRI/TRII
89
1.59%
SMT1/SMT2/SMT3
89
1.59%
CYP71
87
1.55%
STR
83
1.48%
H6H
81
1.44%
CYP90D1
63
1.12%
GS
62
1.1%
TPS
61
1.09%
GES
57
1.02%
IFR
57
1.02%
COMT
57
1.02%
T16H
55
0.98%
CSE
51
0.91%
SGD
49
0.87%
LAC
48
0.86%
ANR
44
0.78%
TAT
41
0.73%
16OMT
38
0.68%
RAS
38
0.68%
IO
37
0.66%
NCS
34
0.61%
HCT
33
0.59%
8HGO
32
0.57%
LAMT
31
0.55%
FNS
31
0.55%
CCR
31
0.55%
BBE
30
0.53%
COR
29
0.52%
G8O/G8H
29
0.52%
SLS
28
0.5%
BR6OX1/CYP85A1
28
0.5%
7DLH
27
0.48%
PMT
27
0.48%
PAL
27
0.48%
MPO
24
0.43%
SQE
24
0.43%
F3'5'H/CYP75A
22
0.39%
PYKS
21
0.37%
ROT3/CYP90C1
21
0.37%
CYP51G1
21
0.37%
CPD/CYP90A1
20
0.36%
CNMT
19
0.34%
DXS
19
0.34%
F5H/CYP84A
15
0.27%
DFR
14
0.25%
AACT
14
0.25%
ANS/LDOX
12
0.21%
CCoAOMT
12
0.21%
TYDC_DDC
11
0.2%
CPR
11
0.2%
ISY
10
0.18%
MVK
10
0.18%
CYP719
9
0.16%
CHS
9
0.16%
FPPS
9
0.16%
CYP80B1
8
0.14%
CHI
8
0.14%
MCT/IspD
8
0.14%
HMGR
8
0.14%
GGPPS
8
0.14%
XMT_MXMT_DXMT
7
0.12%
HPPR
7
0.12%
SMO1/SMO2
7
0.12%
HYD1
6
0.11%
SQS/FDFT1
6
0.11%
ODC
5
0.09%
MVD
5
0.09%
CMK/IspE
5
0.09%
CPI1
4
0.07%
6OMT_4OMT_SOMT
3
0.05%
DET2
3
0.05%
DWF5
3
0.05%
ADC
2
0.04%
TDC
2
0.04%
DWF1
2
0.04%
HMGS
2
0.04%
IDI
2
0.04%
HDR/IspH
2
0.04%
DXR
2
0.04%
CYP80F1
1
0.02%
FLS
1
0.02%
DWF7
1
0.02%
FK
1
0.02%
PMK
1
0.02%
HDS/IspG
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 661 | 18 | BAHD (268) | View species results |
| Alkaloid pathway | 495 | 25 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 436 | 12 | POD (154) | View species results |
| Flavonoid pathway | 264 | 12 | UFGT (168) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (89) | View species results |
| Steroid pathway | 207 | 12 | CAS (90) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2095 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 400 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| VforGWHAAEU000004210006520.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| VforGWHAAEU000009990016730.1 | Alkaloid | NMT | low | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| VforGWHAAEU000013210022640.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| VforGWHAAEU000019210034610.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| VforGWHAAEU000019210035000.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| VforGWHAAEU000023210041980.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| VforGWHAAEU000023210041980.2 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| VforGWHAAEU000023330042560.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| VforGWHAAEU000023330042560.2 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| VforGWHAAEU000023330042560.3 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| VforGWHAAEU000026770048510.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| VforGWHAAEU000026770048510.2 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| VforGWHAAEU000026770048510.3 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| VforGWHAAEU000026770048510.4 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| VforGWHAAEU000026770048510.5 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| VforGWHAAEU000026770048510.6 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| VforGWHAAEU000026770048510.7 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| VforGWHAAEU000027770050730.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| VforGWHAAEU000027770050730.3 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| VforGWHAAEU000027770050760.1 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| VforGWHAAEU000027770050770.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| VforGWHAAEU000028540051800.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| VforGWHAAEU000043320077040.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| VforGWHAAEU000043320077040.2 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| VforGWHAAEU000047210082990.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| VforGWHAAEU000058210095790.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| VforGWHAAEU000058210095790.2 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| VforGWHAAEU000058210095790.3 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| VforGWHAAEU000059990098920.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| VforGWHAAEU000061760101010.1 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| VforGWHAAEU000062210101650.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| VforGWHAAEU000062210101650.2 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| VforGWHAAEU000062210101650.3 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| VforGWHAAEU000062210101650.4 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| VforGWHAAEU000075530121470.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| VforGWHAAEU000075530121470.2 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| VforGWHAAEU000075530121470.3 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| VforGWHAAEU000075530121470.4 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| VforGWHAAEU000076750124560.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| VforGWHAAEU000079740128720.1 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| VforGWHAAEU000079740128720.2 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| VforGWHAAEU000079740128720.3 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| VforGWHAAEU000079740128830.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| VforGWHAAEU000083300134530.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| VforGWHAAEU000088860142820.1 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| VforGWHAAEU000093960149180.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| VforGWHAAEU000093960149180.2 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| VforGWHAAEU000093960149180.3 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| VforGWHAAEU000093960149180.4 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| VforGWHAAEU000093960149180.5 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |