Vernicia fordii (vernicia_fordii)
Imported from atlas release summary for Vernicia fordii.
2274
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2274
Candidate Genes
C4H
5.99%
BAHD
5.86%
C3'H/CYP98A
5.77%
4CL
4.06%
IFS
4.05%
UGT
3.87%
CYP76
3.64%
T3O
3.62%
Other Families
63.14%
More Families (97)
7DLGT
184
3.28%
UFGT
178
3.17%
F3H
176
3.14%
POD
166
2.96%
NMT
148
2.64%
DWF4/CYP90B1
140
2.5%
CAD
111
1.98%
CAS
102
1.82%
F3'H/CYP75B
98
1.75%
CODM/T6ODM
95
1.69%
BR6OX2/CYP85A2
92
1.64%
TRI/TRII
89
1.59%
SMT1/SMT2/SMT3
89
1.59%
CYP71
87
1.55%
STR
83
1.48%
H6H
81
1.44%
CYP90D1
63
1.12%
GS
62
1.1%
TPS
61
1.09%
GES
57
1.02%
IFR
57
1.02%
COMT
57
1.02%
T16H
55
0.98%
CSE
51
0.91%
SGD
49
0.87%
LAC
48
0.86%
ANR
44
0.78%
TAT
41
0.73%
16OMT
38
0.68%
RAS
38
0.68%
IO
37
0.66%
NCS
34
0.61%
HCT
33
0.59%
8HGO
32
0.57%
LAMT
31
0.55%
FNS
31
0.55%
CCR
31
0.55%
BBE
30
0.53%
COR
29
0.52%
G8O/G8H
29
0.52%
SLS
28
0.5%
BR6OX1/CYP85A1
28
0.5%
7DLH
27
0.48%
PMT
27
0.48%
PAL
27
0.48%
MPO
24
0.43%
SQE
24
0.43%
F3'5'H/CYP75A
22
0.39%
PYKS
21
0.37%
ROT3/CYP90C1
21
0.37%
CYP51G1
21
0.37%
CPD/CYP90A1
20
0.36%
CNMT
19
0.34%
DXS
19
0.34%
F5H/CYP84A
15
0.27%
DFR
14
0.25%
AACT
14
0.25%
ANS/LDOX
12
0.21%
CCoAOMT
12
0.21%
TYDC_DDC
11
0.2%
CPR
11
0.2%
ISY
10
0.18%
MVK
10
0.18%
CYP719
9
0.16%
CHS
9
0.16%
FPPS
9
0.16%
CYP80B1
8
0.14%
CHI
8
0.14%
MCT/IspD
8
0.14%
HMGR
8
0.14%
GGPPS
8
0.14%
XMT_MXMT_DXMT
7
0.12%
HPPR
7
0.12%
SMO1/SMO2
7
0.12%
HYD1
6
0.11%
SQS/FDFT1
6
0.11%
ODC
5
0.09%
MVD
5
0.09%
CMK/IspE
5
0.09%
CPI1
4
0.07%
6OMT_4OMT_SOMT
3
0.05%
DET2
3
0.05%
DWF5
3
0.05%
ADC
2
0.04%
TDC
2
0.04%
DWF1
2
0.04%
HMGS
2
0.04%
IDI
2
0.04%
HDR/IspH
2
0.04%
DXR
2
0.04%
CYP80F1
1
0.02%
FLS
1
0.02%
DWF7
1
0.02%
FK
1
0.02%
PMK
1
0.02%
HDS/IspG
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 661 | 18 | BAHD (268) | View species results |
| Alkaloid pathway | 495 | 25 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 436 | 12 | POD (154) | View species results |
| Flavonoid pathway | 264 | 12 | UFGT (168) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (89) | View species results |
| Steroid pathway | 207 | 12 | CAS (90) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2095 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 400 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| VforGWHAAEU000130970261080.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000131750265070.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000134410275170.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000134850277040.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000135630280750.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| VforGWHAAEU000137070286120.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000137070286130.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140520297210.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140860298600.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140860298600.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140860299020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140860299020.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000141750301770.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000146180315130.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VforGWHAAEU000152080333640.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333640.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333640.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333640.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333640.5 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333650.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000156190343960.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000157410346970.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000157410346970.2 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000162180357990.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VforGWHAAEU000179210401080.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000179510402980.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VforGWHAAEU000190370429300.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000190370429300.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000191820432620.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000195490440670.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000201580454810.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000201580454810.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000201580454810.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |