Vernicia fordii (vernicia_fordii)
Imported from atlas release summary for Vernicia fordii.
2745
Candidate Protein Records
2274
Pathway-Level Records
5611
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5611
Family-Level Calls
C4H
5.99%
BAHD
5.86%
C3'H/CYP98A
5.77%
4CL
4.06%
IFS
4.05%
UGT
3.87%
CYP76
3.64%
T3O
3.62%
Other Families
63.14%
More Families (97)
7DLGT
184
3.28%
UFGT
178
3.17%
F3H
176
3.14%
POD
166
2.96%
NMT
148
2.64%
DWF4/CYP90B1
140
2.5%
CAD
111
1.98%
CAS
102
1.82%
F3'H/CYP75B
98
1.75%
CODM/T6ODM
95
1.69%
BR6OX2/CYP85A2
92
1.64%
TRI/TRII
89
1.59%
SMT1/SMT2/SMT3
89
1.59%
CYP71
87
1.55%
STR
83
1.48%
H6H
81
1.44%
CYP90D1
63
1.12%
GS
62
1.1%
TPS
61
1.09%
GES
57
1.02%
IFR
57
1.02%
COMT
57
1.02%
T16H
55
0.98%
CSE
51
0.91%
SGD
49
0.87%
LAC
48
0.86%
ANR
44
0.78%
TAT
41
0.73%
16OMT
38
0.68%
RAS
38
0.68%
IO
37
0.66%
NCS
34
0.61%
HCT
33
0.59%
8HGO
32
0.57%
LAMT
31
0.55%
FNS
31
0.55%
CCR
31
0.55%
BBE
30
0.53%
COR
29
0.52%
G8O/G8H
29
0.52%
SLS
28
0.5%
BR6OX1/CYP85A1
28
0.5%
7DLH
27
0.48%
PMT
27
0.48%
PAL
27
0.48%
MPO
24
0.43%
SQE
24
0.43%
F3'5'H/CYP75A
22
0.39%
PYKS
21
0.37%
ROT3/CYP90C1
21
0.37%
CYP51G1
21
0.37%
CPD/CYP90A1
20
0.36%
CNMT
19
0.34%
DXS
19
0.34%
F5H/CYP84A
15
0.27%
DFR
14
0.25%
AACT
14
0.25%
ANS/LDOX
12
0.21%
CCoAOMT
12
0.21%
TYDC_DDC
11
0.2%
CPR
11
0.2%
ISY
10
0.18%
MVK
10
0.18%
CYP719
9
0.16%
CHS
9
0.16%
FPPS
9
0.16%
CYP80B1
8
0.14%
CHI
8
0.14%
MCT/IspD
8
0.14%
HMGR
8
0.14%
GGPPS
8
0.14%
XMT_MXMT_DXMT
7
0.12%
HPPR
7
0.12%
SMO1/SMO2
7
0.12%
HYD1
6
0.11%
SQS/FDFT1
6
0.11%
ODC
5
0.09%
MVD
5
0.09%
CMK/IspE
5
0.09%
CPI1
4
0.07%
6OMT_4OMT_SOMT
3
0.05%
DET2
3
0.05%
DWF5
3
0.05%
ADC
2
0.04%
TDC
2
0.04%
DWF1
2
0.04%
HMGS
2
0.04%
IDI
2
0.04%
HDR/IspH
2
0.04%
DXR
2
0.04%
CYP80F1
1
0.02%
FLS
1
0.02%
DWF7
1
0.02%
FK
1
0.02%
PMK
1
0.02%
HDS/IspG
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 661 | 18 | BAHD (268) | View species results |
| Alkaloid pathway | 495 | 25 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 436 | 12 | POD (154) | View species results |
| Flavonoid pathway | 264 | 12 | UFGT (168) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (89) | View species results |
| Steroid pathway | 207 | 12 | CAS (90) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2095 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 400 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| VforGWHAAEU000078970127890.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000094290149600.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000094290149600.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000094290149600.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000094290149600.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000118210180330.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000118210180330.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000118210180330.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000120630198190.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VforGWHAAEU000121430203830.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000122520212040.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000122520212050.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000128410249030.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| VforGWHAAEU000128410249410.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000128420250230.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000129530255300.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000130080257330.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000130630259460.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000130630259460.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000130630259460.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000130970261080.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000131750265070.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000134410275170.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000134850277040.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000135630280750.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| VforGWHAAEU000137070286120.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000137070286130.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140520297210.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140860298600.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140860298600.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140860299020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000140860299020.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000141750301770.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000146180315130.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VforGWHAAEU000152080333640.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333640.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333640.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333640.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333640.5 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000152080333650.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000156190343960.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000157410346970.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000157410346970.2 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000162180357990.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VforGWHAAEU000179210401080.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000179510402980.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VforGWHAAEU000190370429300.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000190370429300.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000191820432620.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VforGWHAAEU000195490440670.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |