Vicia sativa (vicia_sativa)
Imported from atlas release summary for Vicia sativa.
2015
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2015
Candidate Genes
C3'H/CYP98A
5.98%
C4H
5.7%
BAHD
5.23%
UGT
5.03%
UFGT
4.57%
7DLGT
4.47%
IFS
4.09%
T3O
3.71%
Other Families
61.21%
More Families (98)
4CL
177
3.55%
CYP76
176
3.53%
POD
175
3.51%
F3H
146
2.93%
DWF4/CYP90B1
97
1.95%
NMT
94
1.89%
F3'H/CYP75B
87
1.74%
CODM/T6ODM
86
1.72%
BR6OX2/CYP85A2
86
1.72%
CSE
75
1.5%
STR
73
1.46%
SGD
67
1.34%
CYP71
67
1.34%
SMT1/SMT2/SMT3
65
1.3%
H6H
64
1.28%
CAD
58
1.16%
PYKS
57
1.14%
TRI/TRII
56
1.12%
CYP90D1
53
1.06%
IFR
51
1.02%
CAS
51
1.02%
COMT
50
1.0%
HCT
47
0.94%
PAL
45
0.9%
ANR
44
0.88%
BBE
42
0.84%
LAC
39
0.78%
RAS
38
0.76%
T16H
37
0.74%
CCR
37
0.74%
7DLH
35
0.7%
CYP51G1
35
0.7%
G8O/G8H
34
0.68%
GS
32
0.64%
TPS
32
0.64%
GES
30
0.6%
PMT
30
0.6%
16OMT
30
0.6%
NCS
29
0.58%
IO
28
0.56%
CHS
26
0.52%
F3'5'H/CYP75A
25
0.5%
CPD/CYP90A1
25
0.5%
FNS
24
0.48%
COR
22
0.44%
SLS
21
0.42%
BR6OX1/CYP85A1
20
0.4%
F5H/CYP84A
19
0.38%
8HGO
18
0.36%
DFR
18
0.36%
LAMT
17
0.34%
ROT3/CYP90C1
16
0.32%
CCoAOMT
13
0.26%
TAT
13
0.26%
TYDC_DDC
10
0.2%
CHI
10
0.2%
ANS/LDOX
10
0.2%
HPPR
10
0.2%
DWF5
9
0.18%
CNMT
8
0.16%
CYP719
8
0.16%
MPO
8
0.16%
CPR
8
0.16%
AACT
8
0.16%
FPPS
8
0.16%
TDC
7
0.14%
DET2
7
0.14%
SQS/FDFT1
7
0.14%
GGPPS
7
0.14%
MVK
7
0.14%
CYP80B1
6
0.12%
ADC
6
0.12%
SQE
6
0.12%
DXS
6
0.12%
ISY
5
0.1%
HMGR
5
0.1%
FLS
4
0.08%
SMO1/SMO2
4
0.08%
DWF7
4
0.08%
DXR
4
0.08%
HDR/IspH
4
0.08%
MVD
4
0.08%
XMT_MXMT_DXMT
3
0.06%
IDI
3
0.06%
PMK
3
0.06%
MDS/IspF
3
0.06%
DWF1
2
0.04%
CPI1
2
0.04%
MCT/IspD
2
0.04%
CMK/IspE
2
0.04%
HMGS
2
0.04%
HDS/IspG
2
0.04%
CYP80F1
1
0.02%
6OMT_4OMT_SOMT
1
0.02%
ODC
1
0.02%
FK
1
0.02%
HYD1
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 564 | 21 | UGT (237) | View species results |
| Alkaloid pathway | 447 | 27 | 7DLGT (102) | View species results |
| Phenylpropanoid pathway | 419 | 11 | POD (158) | View species results |
| Flavonoid pathway | 322 | 8 | UFGT (213) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (62) | View species results |
| Steroid pathway | 105 | 12 | SMT1/SMT2/SMT3 (44) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1847 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 346 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| vicia_sativa_jg10188.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg10189.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg10190.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg10192.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg10193.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg10194.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg10195.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg14977.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg14978.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg14985.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg17726.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg28162.t1 | Alkaloid | GS | medium | pass |
| vicia_sativa_jg28339.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg31645.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg35020.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg38024.t1 | Alkaloid | GS | medium | pass |
| vicia_sativa_jg38187.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg38188.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg38907.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg40154.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg40409.t1 | Alkaloid | GS | high | pass |
| vicia_sativa_jg43592.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg44652.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg45316.t1 | Alkaloid | GS | medium | pass |
| vicia_sativa_jg45627.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg54193.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg54194.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg5425.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg56213.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg56214.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg56347.t1 | Alkaloid | GS | low | borderline |
| vicia_sativa_jg6949.t1 | Alkaloid | GS | low | borderline |